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Aliases for HMGN1P2 Gene

Aliases for HMGN1P2 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 2 2 3 5
  • High-Mobility Group (Nonhistone Chromosomal) Protein 14 Pseudogene 2 3
  • High-Mobility Group Nucleosome Binding Domain 1-Like 2 2 3
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 2 2
  • Nonhistone Chromosomal Protein HMG-14 Pseudogene 3
  • HMGN1L2 3
  • HMG14P 3

External Ids for HMGN1P2 Gene

Previous HGNC Symbols for HMGN1P2 Gene

  • HMG14P
  • HMGN1L2

Previous GeneCards Identifiers for HMGN1P2 Gene

  • GC21P033080

Summaries for HMGN1P2 Gene

GeneCards Summary for HMGN1P2 Gene

HMGN1P2 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P2 Gene

Genomics for HMGN1P2 Gene

Regulatory Elements for HMGN1P2 Gene

Enhancers for HMGN1P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21F031708 0.9 Ensembl ENCODE 0.8 +3.5 3546 2.6 BCOR ZMYM3 CEBPB FEZF1 TSHZ1 ZIC2 OSR2 ZNF121 BCL11A ADNP ENSG00000238390 SOD1 LOC102724449 LOC150051 TIAM1 HMGN1P2 GC21P031707 SCAF4
GH21F031707 0.7 Ensembl 0.8 +0.8 846 0.4 L3MBTL2 MTA2 RNF2 ZFP37 TBX21 ZNF664 FOSL1 ZNF335 ZNF366 ATF3 ENSG00000238390 LOC102724449 SOD1 HMGN1P2 GC21P031707 SCAF4
GH21F031713 1.1 Ensembl ENCODE 0.4 +8.3 8282 1.7 HDAC1 PKNOX1 CBX3 ARNT TBL1XR1 GATA2 CREM NCOA1 JUNB SMARCA4 ENSG00000238390 SOD1 LOC102724449 GC21P031707 HMGN1P2 SCAF4
GH21F031716 0.7 Ensembl 0.4 +9.9 9946 0.6 RNF2 MAFG ARID1B ZNF664 ZNF316 SMARCA4 THRAP3 NFE2L1 HMBOX1 NFE2 ENSG00000238390 SOD1 LOC102724449 GC21P031707 HMGN1P2 SCAF4
GH21F031670 0.9 FANTOM5 ENCODE 0.3 -36.2 -36197 0.3 ZEB2 ZIC2 JUND POLR2A ZNF692 ZNF239 ZBTB17 SUPT5H ENSG00000273271 GC21P031707 HMGN1P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN1P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P2 Gene

Chromosome:
21
Start:
31,706,555 bp from pter
End:
31,707,183 bp from pter
Size:
629 bases
Orientation:
Plus strand

Genomic View for HMGN1P2 Gene

Genes around HMGN1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P2 Gene

Proteins for HMGN1P2 Gene

Post-translational modifications for HMGN1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P2 Gene

Domains & Families for HMGN1P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P2 Gene

Function for HMGN1P2 Gene

Phenotypes for HMGN1P2 Gene

GenomeRNAi human phenotypes for HMGN1P2:
genes like me logo Genes that share phenotypes with HMGN1P2: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P2 Gene

Localization for HMGN1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P2 Gene

Pathways & Interactions for HMGN1P2 Gene

SuperPathways for HMGN1P2 Gene

No Data Available

Interacting Proteins for HMGN1P2 Gene

Gene Ontology (GO) - Biological Process for HMGN1P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P2 Gene

Transcripts for HMGN1P2 Gene

mRNA/cDNA for HMGN1P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P2 Gene

No ASD Table

Relevant External Links for HMGN1P2 Gene

GeneLoc Exon Structure for
HMGN1P2
ECgene alternative splicing isoforms for
HMGN1P2

Expression for HMGN1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGN1P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P2 Gene:

HMGN1P2
genes like me logo Genes that share expression patterns with HMGN1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGN1P2 Gene

Orthologs for HMGN1P2 Gene

Evolution for HMGN1P2 Gene

ENSEMBL:
Gene Tree for HMGN1P2 (if available)
TreeFam:
Gene Tree for HMGN1P2 (if available)

No data available for Orthologs for HMGN1P2 Gene

Paralogs for HMGN1P2 Gene

No data available for Paralogs for HMGN1P2 Gene

Variants for HMGN1P2 Gene

Relevant External Links for HMGN1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P2 Gene

Disorders for HMGN1P2 Gene

No disorders were found for HMGN1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P2 Gene

Publications for HMGN1P2 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
  2. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 3 64

Products for HMGN1P2 Gene

Sources for HMGN1P2 Gene

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