Aliases for HMGN1P18 Gene
Aliases for HMGN1P18 Gene
External Ids for HMGN1P18 Gene
- HGNC: 39362
- Entrez Gene: 100874444
- Ensembl: ENSG00000234927
Previous GeneCards Identifiers for HMGN1P18 Gene
- GC00U931574
- GC07P120691
Summaries for HMGN1P18 Gene
GeneCards Summary for HMGN1P18 Gene
HMGN1P18 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 18) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P18 Gene
Genomics for HMGN1P18 Gene
Regulatory Elements for HMGN1P18 Gene
Enhancers for HMGN1P18 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH07G121049 | 1.2 | ENCODE dbSUPER | 0.7 | -1.4 | -1426 | 0.2 | PKNOX1 ATF1 ARNT TCF12 ZNF766 GATA2 CAVIN1 ZNF592 MEF2D CREB3 | TSPAN12 HMGN1P18 CPED1 |
| GH07G121041 | 1.5 | Ensembl ENCODE dbSUPER | 0.4 | -9.0 | -8951 | 1.4 | ATF1 CREB3L1 ARNT FEZF1 TCF12 ZNF766 ELK1 GATA2 CAVIN1 NCOA1 | CPED1 HMGN1P18 |
| GH07G121038 | 1.3 | ENCODE dbSUPER | 0.4 | -11.9 | -11891 | 1.3 | HDGF PKNOX1 ATF1 CREB3L1 ARNT TCF12 ZNF766 ELK1 GATA2 NCOA1 | CPED1 TSPAN12 HMGN1P18 |
| GH07G121018 | 1.7 | FANTOM5 Ensembl ENCODE dbSUPER | 0.3 | -30.9 | -30886 | 2.8 | FOXA2 ATF1 ZNF133 ZBTB40 CHAMP1 YY1 EGR1 FOS ZNF174 ZNF362 | TSPAN12 ING3 HMGN1P18 CPED1 |
| GH07G121075 | 1.5 | Ensembl ENCODE dbSUPER | 0.3 | +25.8 | 25786 | 1.8 | PKNOX1 ATF1 CREB3L1 ARNT TCF12 ZNF766 ELK1 GATA2 FOS JUNB | CPED1 ING3 GC07M121084 RNA5SP241 HMGN1P18 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around HMGN1P18 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for HMGN1P18 Gene
- Chromosome:
- 7
- Start:
- 121,050,927 bp from pter
- End:
- 121,051,203 bp from pter
- Size:
- 277 bases
- Orientation:
- Plus strand
Genomic View for HMGN1P18 Gene
Genes around HMGN1P18 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 7q31.31 by Ensembl
- 7q31.31 by Entrez Gene
- 7q31.31 by HGNC
HMGN1P18 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HMGN1P18 Gene
Proteins for HMGN1P18 Gene
Post-translational modifications for HMGN1P18 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for HMGN1P18
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HMGN1P18
- Origene Custom Protein Services for HMGN1P18
- Search GeneTex for Proteins for HMGN1P18
Assay Products
No data available for DME Specific Peptides for HMGN1P18 Gene
Domains & Families for HMGN1P18 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P18 Gene
Function for HMGN1P18 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HMGN1P18
CRISPR Products
- Browse CRISPR knockouts for HMGN1P18
miRNA Products
- Search ViGene Biosciences for HMGN1P18
Inhibitory RNA Products
- Search ViGene Biosciences for HMGN1P18
Cell Line Products
- Search ViGene Biosciences for HMGN1P18
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P18 Gene
Localization for HMGN1P18 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P18 Gene
Transcripts for HMGN1P18 Gene
mRNA/cDNA for HMGN1P18 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for HMGN1P18
miRNA Products
- Search ViGene Biosciences for HMGN1P18
Inhibitory RNA Products
- Search ViGene Biosciences for HMGN1P18
Flow Cytometry Products
Expression for HMGN1P18 Gene
mRNA differential expression in normal tissues according to GTEx for HMGN1P18 Gene
This gene is overexpressed in Ovary (x4.6).
NURSA nuclear receptor signaling pathways regulating expression of HMGN1P18 Gene:
HMGN1P18
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P18 Gene
Orthologs for HMGN1P18 Gene
No data available for Orthologs for HMGN1P18 Gene
Paralogs for HMGN1P18 Gene
No data available for Paralogs for HMGN1P18 Gene
Variants for HMGN1P18 Gene
Relevant External Links for HMGN1P18 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HMGN1P18
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P18 Gene
Disorders for HMGN1P18 Gene
No disorders were found for HMGN1P18 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P18 Gene
Publications for HMGN1P18 Gene
- Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
Products for HMGN1P18 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HMGN1P18
- Origene Custom Protein Services for HMGN1P18
- Browse OriGene Inhibitory RNA Products For HMGN1P18
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for HMGN1P18
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HMGN1P18
- GenScript: Custom all cDNA clones Services for HMGN1P18
- GenScript Custom Purified and Recombinant Proteins Services for HMGN1P18
- GenScript Custom Assay Services for HMGN1P18
- GenScript Custom overexpressing Cell Line Services for HMGN1P18
- Browse GenScript CRISPR for HMGN1P18
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
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- Browse Sino Biological cDNA Clones
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- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HMGN1P18
- VectorBuilder custom plasmid, inducible vectors for HMGN1P18
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HMGN1P18
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HMGN1P18 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer