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Aliases for HMGN1P18 Gene

Aliases for HMGN1P18 Gene

  • High Mobility Group Nucleosome Binding Domain 1 Pseudogene 18 2 3 5
  • High-Mobility Group Nucleosome Binding Domain 1 Pseudogene 18 2

External Ids for HMGN1P18 Gene

Previous GeneCards Identifiers for HMGN1P18 Gene

  • GC00U931574
  • GC07P120691

Summaries for HMGN1P18 Gene

GeneCards Summary for HMGN1P18 Gene

HMGN1P18 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 18) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P18 Gene

Genomics for HMGN1P18 Gene

Regulatory Elements for HMGN1P18 Gene

Enhancers for HMGN1P18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G121049 1.2 ENCODE dbSUPER 0.7 -1.4 -1426 0.2 PKNOX1 ATF1 ARNT TCF12 ZNF766 GATA2 CAVIN1 ZNF592 MEF2D CREB3 TSPAN12 HMGN1P18 CPED1
GH07G121041 1.5 Ensembl ENCODE dbSUPER 0.4 -9.0 -8951 1.4 ATF1 CREB3L1 ARNT FEZF1 TCF12 ZNF766 ELK1 GATA2 CAVIN1 NCOA1 CPED1 HMGN1P18
GH07G121038 1.3 ENCODE dbSUPER 0.4 -11.9 -11891 1.3 HDGF PKNOX1 ATF1 CREB3L1 ARNT TCF12 ZNF766 ELK1 GATA2 NCOA1 CPED1 TSPAN12 HMGN1P18
GH07G121018 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -30.9 -30886 2.8 FOXA2 ATF1 ZNF133 ZBTB40 CHAMP1 YY1 EGR1 FOS ZNF174 ZNF362 TSPAN12 ING3 CPED1 HMGN1P18
GH07G121075 1.5 Ensembl ENCODE dbSUPER 0.3 +25.8 25786 1.8 PKNOX1 ATF1 CREB3L1 ARNT TCF12 ZNF766 ELK1 GATA2 FOS JUNB CPED1 ING3 GC07M121084 RNA5SP241 HMGN1P18
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGN1P18 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGN1P18 Gene

Chromosome:
7
Start:
121,050,927 bp from pter
End:
121,051,203 bp from pter
Size:
277 bases
Orientation:
Plus strand

Genomic View for HMGN1P18 Gene

Genes around HMGN1P18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGN1P18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGN1P18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGN1P18 Gene

Proteins for HMGN1P18 Gene

Post-translational modifications for HMGN1P18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGN1P18 Gene

Domains & Families for HMGN1P18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P18 Gene

Function for HMGN1P18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P18 Gene

Localization for HMGN1P18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P18 Gene

Pathways & Interactions for HMGN1P18 Gene

SuperPathways for HMGN1P18 Gene

No Data Available

Interacting Proteins for HMGN1P18 Gene

Gene Ontology (GO) - Biological Process for HMGN1P18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGN1P18 Gene

Drugs & Compounds for HMGN1P18 Gene

No Compound Related Data Available

Transcripts for HMGN1P18 Gene

mRNA/cDNA for HMGN1P18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGN1P18 Gene

No ASD Table

Relevant External Links for HMGN1P18 Gene

GeneLoc Exon Structure for
HMGN1P18
ECgene alternative splicing isoforms for
HMGN1P18

Expression for HMGN1P18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGN1P18 Gene

mRNA differential expression in normal tissues according to GTEx for HMGN1P18 Gene

This gene is overexpressed in Ovary (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of HMGN1P18 Gene:

HMGN1P18
genes like me logo Genes that share expression patterns with HMGN1P18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P18 Gene

Orthologs for HMGN1P18 Gene

Evolution for HMGN1P18 Gene

ENSEMBL:
Gene Tree for HMGN1P18 (if available)
TreeFam:
Gene Tree for HMGN1P18 (if available)

No data available for Orthologs for HMGN1P18 Gene

Paralogs for HMGN1P18 Gene

No data available for Paralogs for HMGN1P18 Gene

Variants for HMGN1P18 Gene

Relevant External Links for HMGN1P18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGN1P18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P18 Gene

Disorders for HMGN1P18 Gene

No disorders were found for HMGN1P18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P18 Gene

Publications for HMGN1P18 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGN1P18 Gene

Sources for HMGN1P18 Gene

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