Aliases for HMGN1P16 Gene
Subcategory (RNA class) for HMGN1P16 Gene
lncRNA
Aliases for HMGN1P16 Gene
External Ids for HMGN1P16 Gene
- HGNC: 39360
- Entrez Gene: 100874442
- Ensembl: ENSG00000249503
ORGUL Members for HMGN1P16 Gene
Previous GeneCards Identifiers for HMGN1P16 Gene
- GC00U931242
- GC05M147601
Summaries for HMGN1P16 Gene
GeneCards Summary for HMGN1P16 Gene
HMGN1P16 (High Mobility Group Nucleosome Binding Domain 1 Pseudogene 16) is a Pseudogene, and is affiliated with the lncRNA class.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGN1P16 Gene
Genomics for HMGN1P16 Gene
Regulatory Elements for HMGN1P16 Gene
Enhancers for HMGN1P16 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH05G148205 | 0.9 | FANTOM5 Ensembl | 0.4 | +16.1 | 16086 | 0.5 | JUND HNF4G MAX HNF4A ZBTB33 GABPA YY1 | SPINK7 SPINK14 SPINK9 SPINK13 FBXO38 SPINK6 HMGN1P16 |
| GH05G148202 | 0.5 | ENCODE | 0.4 | +18.8 | 18784 | 0.9 | CEBPA HLF CREB1 CEBPB CEBPG | SPINK6 HMGN1P16 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around HMGN1P16 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for HMGN1P16 Gene
- Chromosome:
- 5
- Start:
- 148,221,360 bp from pter
- End:
- 148,221,642 bp from pter
- Size:
- 283 bases
- Orientation:
- Minus strand
Genomic View for HMGN1P16 Gene
Genes around HMGN1P16 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 5q32 by Ensembl
- 5q32 by Entrez Gene
- 5q32 by HGNC
HMGN1P16 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HMGN1P16 Gene
Proteins for HMGN1P16 Gene
Post-translational modifications for HMGN1P16 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for HMGN1P16
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HMGN1P16
- Origene Custom Protein Services for HMGN1P16
- Search GeneTex for Proteins for HMGN1P16
Assay Products
No data available for DME Specific Peptides for HMGN1P16 Gene
Domains & Families for HMGN1P16 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGN1P16 Gene
Function for HMGN1P16 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HMGN1P16
CRISPR Products
- Browse CRISPR knockouts for HMGN1P16
miRNA Products
- Search ViGene Biosciences for HMGN1P16
Inhibitory RNA Products
- Search ViGene Biosciences for HMGN1P16
Cell Line Products
- Search ViGene Biosciences for HMGN1P16
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGN1P16 Gene
Localization for HMGN1P16 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGN1P16 Gene
Transcripts for HMGN1P16 Gene
mRNA/cDNA for HMGN1P16 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for HMGN1P16
miRNA Products
- Search ViGene Biosciences for HMGN1P16
Inhibitory RNA Products
- Search ViGene Biosciences for HMGN1P16
Flow Cytometry Products
Expression for HMGN1P16 Gene
NURSA nuclear receptor signaling pathways regulating expression of HMGN1P16 Gene:
HMGN1P16
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGN1P16 Gene
Orthologs for HMGN1P16 Gene
No data available for Orthologs for HMGN1P16 Gene
Paralogs for HMGN1P16 Gene
No data available for Paralogs for HMGN1P16 Gene
Variants for HMGN1P16 Gene
Relevant External Links for HMGN1P16 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HMGN1P16
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGN1P16 Gene
Disorders for HMGN1P16 Gene
No disorders were found for HMGN1P16 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGN1P16 Gene
Publications for HMGN1P16 Gene
- Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
Products for HMGN1P16 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HMGN1P16
- Origene Custom Protein Services for HMGN1P16
- Browse OriGene Inhibitory RNA Products For HMGN1P16
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for HMGN1P16
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HMGN1P16
- GenScript: Custom all cDNA clones Services for HMGN1P16
- GenScript Custom Purified and Recombinant Proteins Services for HMGN1P16
- GenScript Custom Assay Services for HMGN1P16
- GenScript Custom overexpressing Cell Line Services for HMGN1P16
- Browse GenScript CRISPR for HMGN1P16
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for HMGN1P16
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HMGN1P16
- VectorBuilder custom plasmid, inducible vectors for HMGN1P16
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HMGN1P16
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HMGN1P16 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer