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Aliases for HMGB3P4 Gene

Subcategory (RNA class) for HMGB3P4 Gene


Aliases for HMGB3P4 Gene

  • High Mobility Group Box 3 Pseudogene 4 2 3 5
  • High-Mobility Group Box 3 Pseudogene 4 2

External Ids for HMGB3P4 Gene

ORGUL Members for HMGB3P4 Gene

Previous GeneCards Identifiers for HMGB3P4 Gene

  • GC00U931579
  • GC13P100025

Summaries for HMGB3P4 Gene

GeneCards Summary for HMGB3P4 Gene

HMGB3P4 (High Mobility Group Box 3 Pseudogene 4) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB3P4 Gene

Genomics for HMGB3P4 Gene

Regulatory Elements for HMGB3P4 Gene

Enhancers for HMGB3P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F100360 2.1 Ensembl ENCODE 10 +991.2 991178 4.8 INSM2 KLF17 FEZF1 RAD21 ZEB1 ZNF366 ZNF391 FOS ZNF362 SP3 TM9SF2 HMGB3P4 PCCA-AS1 GC13M100358 LOC105370335
GH13F099319 1.6 FANTOM5 Ensembl ENCODE 10.2 -50.4 -50434 4.5 PKNOX1 FEZF1 ZNF2 KLF7 FOS ZNF202 JUNB TBX21 ZNF264 CBX8 TM9SF2 MIR623 STK24-AS1 GPR18 HMGB3P4 UBAC2 GPR183 GC13M099261
GH13F099978 1.6 FANTOM5 Ensembl ENCODE 10 +611.3 611344 10.8 SIN3A FEZF1 GLI4 BRCA1 ZNF2 ZNF121 GLIS2 FOS ZNF202 ZNF263 LINC00554 ZIC5 LINC01039 CFL1P8 ARF4P3 RN7SKP9 LINC00411 TM9SF2 HMGB3P4 ZIC2
GH13F098547 1.4 Ensembl ENCODE 10 -823.1 -823135 3.4 PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 FOS SP3 STK24-AS1 STK24 RN7SKP9 TM9SF2 HMGB3P4 ENSG00000271437 GC13P098445
GH13F099198 1.1 ENCODE 10.1 -171.5 -171525 5.1 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 SP3 SP5 LINC00554 STK24-AS1 RN7SKP9 LINC01039 CFL1P8 TM9SF2 HMGB3P4 UBAC2 GPR18 UBAC2-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGB3P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB3P4 Gene

99,372,173 bp from pter
99,372,686 bp from pter
514 bases
Plus strand

Genomic View for HMGB3P4 Gene

Genes around HMGB3P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB3P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB3P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB3P4 Gene

Proteins for HMGB3P4 Gene

Post-translational modifications for HMGB3P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB3P4 Gene

Domains & Families for HMGB3P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB3P4 Gene

Function for HMGB3P4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB3P4 Gene

Localization for HMGB3P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB3P4 Gene

Pathways & Interactions for HMGB3P4 Gene

SuperPathways for HMGB3P4 Gene

No Data Available

Interacting Proteins for HMGB3P4 Gene

Gene Ontology (GO) - Biological Process for HMGB3P4 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGB3P4 Gene

Transcripts for HMGB3P4 Gene

mRNA/cDNA for HMGB3P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB3P4 Gene

No ASD Table

Relevant External Links for HMGB3P4 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGB3P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGB3P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB3P4 Gene:

genes like me logo Genes that share expression patterns with HMGB3P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGB3P4 Gene

Orthologs for HMGB3P4 Gene

Evolution for HMGB3P4 Gene

Gene Tree for HMGB3P4 (if available)
Gene Tree for HMGB3P4 (if available)

No data available for Orthologs for HMGB3P4 Gene

Paralogs for HMGB3P4 Gene

No data available for Paralogs for HMGB3P4 Gene

Variants for HMGB3P4 Gene

Relevant External Links for HMGB3P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB3P4 Gene

Disorders for HMGB3P4 Gene

No disorders were found for HMGB3P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB3P4 Gene

Publications for HMGB3P4 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGB3P4 Gene

Sources for HMGB3P4 Gene

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