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Aliases for HMGB3P2 Gene

Aliases for HMGB3P2 Gene

  • High Mobility Group Box 3 Pseudogene 2 2 3 5
  • High-Mobility Group (Nonhistone Chromosomal) Protein 4-Like 2 2 3
  • High-Mobility Group Box 3-Like 2 2 3
  • High-Mobility Group Box 3 Pseudogene 2 2
  • High Mobility Group Protein Pseudogene 3
  • DJ550H1.1 3
  • HMGB3L2 3
  • HMG4L2 3

External Ids for HMGB3P2 Gene

Previous HGNC Symbols for HMGB3P2 Gene

  • HMG4L2
  • HMGB3L2

Previous GeneCards Identifiers for HMGB3P2 Gene

  • GC20M034665

Summaries for HMGB3P2 Gene

GeneCards Summary for HMGB3P2 Gene

HMGB3P2 (High Mobility Group Box 3 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB3P2 Gene

Genomics for HMGB3P2 Gene

Regulatory Elements for HMGB3P2 Gene

Enhancers for HMGB3P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20F036091 0.7 FANTOM5 ENCODE 16.5 -16.3 -16335 3.6 SIN3A ZNF2 YY1 REST SMARCB1 KAT8 MEF2D SMARCA4 GLIS1 KDM1A EPB41L1 HMGB3P2 RPF2P1 C20orf173 ENSG00000242507 RPL36P4 CNBD2 CPNE1 DLGAP4 ENSG00000237063
GH20F035765 1 FANTOM5 ENCODE 16.2 +307.2 307209 9.2 HDGF PKNOX1 ARNT MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 CPNE1 RBM12 NCOA6 PHF20 AAR2 TRPC4AP PROCR RPF2P1 C20orf173 HMGB3P2
GH20F035756 0.4 ENCODE 16.2 +319.0 318952 1.6 ELF3 PKNOX1 ZNF792 KLF17 ZNF384 CEBPG ZIC2 ZSCAN9 ZFHX2 CTBP1 CPNE1 RPF2P1 C20orf173 HMGB3P2 ENSG00000242507 CNBD2 MMP24-AS1 ENSG00000283527
GH20F036988 1.2 FANTOM5 Ensembl ENCODE 16.2 -912.4 -912448 2.4 HDGF PKNOX1 ARNT MLX CREB3L1 ZFP64 ARID4B SIN3A DMAP1 YBX1 AAR2 RBL1 LINC00489 HMGB3P2 MROH8 TGIF2 LOC100419562 DLGAP4-AS1 TLDC2 LOC100287792
GH20F035165 0.6 Ensembl ENCODE 16.2 +910.3 910262 1.4 HDAC1 TAL1 ETV1 JUN ZMYM3 ZNF175 MAX RAD21 CCNT2 RBAK EDEM2 C20orf173 RPF2P1 HMGB3P2 MMP24-AS1 ENSG00000242507 PROCR CNBD2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGB3P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB3P2 Gene

Chromosome:
20
Start:
36,076,000 bp from pter
End:
36,076,754 bp from pter
Size:
755 bases
Orientation:
Minus strand

Genomic View for HMGB3P2 Gene

Genes around HMGB3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB3P2 Gene

Proteins for HMGB3P2 Gene

Post-translational modifications for HMGB3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB3P2 Gene

Domains & Families for HMGB3P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB3P2 Gene

Function for HMGB3P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB3P2 Gene

Localization for HMGB3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB3P2 Gene

Pathways & Interactions for HMGB3P2 Gene

SuperPathways for HMGB3P2 Gene

No Data Available

Interacting Proteins for HMGB3P2 Gene

Gene Ontology (GO) - Biological Process for HMGB3P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB3P2 Gene

Transcripts for HMGB3P2 Gene

mRNA/cDNA for HMGB3P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB3P2 Gene

No ASD Table

Relevant External Links for HMGB3P2 Gene

GeneLoc Exon Structure for
HMGB3P2
ECgene alternative splicing isoforms for
HMGB3P2

Expression for HMGB3P2 Gene

mRNA expression in normal human tissues for HMGB3P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB3P2 Gene:

HMGB3P2
genes like me logo Genes that share expression patterns with HMGB3P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGB3P2 Gene

Orthologs for HMGB3P2 Gene

Evolution for HMGB3P2 Gene

ENSEMBL:
Gene Tree for HMGB3P2 (if available)
TreeFam:
Gene Tree for HMGB3P2 (if available)

No data available for Orthologs for HMGB3P2 Gene

Paralogs for HMGB3P2 Gene

No data available for Paralogs for HMGB3P2 Gene

Variants for HMGB3P2 Gene

Relevant External Links for HMGB3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB3P2 Gene

Disorders for HMGB3P2 Gene

No disorders were found for HMGB3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB3P2 Gene

Publications for HMGB3P2 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGB3P2 Gene

Sources for HMGB3P2 Gene

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