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Aliases for HMGB3P2 Gene

Aliases for HMGB3P2 Gene

  • High Mobility Group Box 3 Pseudogene 2 2 3 5
  • High-Mobility Group (Nonhistone Chromosomal) Protein 4-Like 2 2 3
  • High-Mobility Group Box 3-Like 2 2 3
  • High-Mobility Group Box 3 Pseudogene 2 2
  • High Mobility Group Protein Pseudogene 3
  • DJ550H1.1 3
  • HMGB3L2 3
  • HMG4L2 3

External Ids for HMGB3P2 Gene

Previous HGNC Symbols for HMGB3P2 Gene

  • HMG4L2
  • HMGB3L2

Previous GeneCards Identifiers for HMGB3P2 Gene

  • GC20M034665

Summaries for HMGB3P2 Gene

GeneCards Summary for HMGB3P2 Gene

HMGB3P2 (High Mobility Group Box 3 Pseudogene 2) is a Pseudogene.

Additional gene information for HMGB3P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB3P2 Gene

Genomics for HMGB3P2 Gene

GeneHancer (GH) Regulatory Elements for HMGB3P2 Gene

Promoters and enhancers for HMGB3P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I036076 Enhancer 0.3 dbSUPER 550.8 +0.1 92 0.2 ZBTB33 HMGB3P2 ENSG00000234139 EPB41L1
GH20I036079 Enhancer 0.7 dbSUPER 0.8 -3.1 -3095 1 HDAC1 MEIS2 ZNF146 PKNOX1 ETV1 ZMYM3 E4F1 FOSL1 CTBP1 ZNF316 HMGB3P2 ENSG00000234139 ENSG00000237063 EPB41L1
GH20I036082 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -8.3 -8316 5 PKNOX1 ATF1 SIN3A ZNF766 ATF7 FOS DEK CAVIN1 NFYC REST EPB41L1 RBM39 RBM12 RPL36P4 CPNE1 AAR2 CNBD2 PROCR ENSG00000237063 HMGB3P2
GH20I036087 Enhancer 0.6 ENCODE dbSUPER 0.4 -11.1 -11100 0.2 PRDM10 KDM1A TCF7L2 ENSG00000237063 HMGB3P2 EPB41L1
GH20I036072 Enhancer 0.2 dbSUPER 0.8 +3.0 3042 1.9 ENSG00000234139 EPB41L1 CPNE1 HMGB3P2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGB3P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGB3P2 Gene

Genomic Locations for HMGB3P2 Gene
chr20:36,076,000-36,076,754
(GRCh38/hg38)
Size:
755 bases
Orientation:
Minus strand
chr20:34,663,940-34,664,523
(GRCh37/hg19)

Genomic View for HMGB3P2 Gene

Genes around HMGB3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB3P2 Gene

Proteins for HMGB3P2 Gene

Post-translational modifications for HMGB3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB3P2 Gene

Domains & Families for HMGB3P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB3P2 Gene

Function for HMGB3P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB3P2 Gene

Localization for HMGB3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB3P2 Gene

Pathways & Interactions for HMGB3P2 Gene

SuperPathways for HMGB3P2 Gene

No Data Available

Interacting Proteins for HMGB3P2 Gene

Gene Ontology (GO) - Biological Process for HMGB3P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB3P2 Gene

Drugs & Compounds for HMGB3P2 Gene

No Compound Related Data Available

Transcripts for HMGB3P2 Gene

mRNA/cDNA for HMGB3P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB3P2 Gene

No ASD Table

Relevant External Links for HMGB3P2 Gene

GeneLoc Exon Structure for
HMGB3P2
ECgene alternative splicing isoforms for
HMGB3P2

Expression for HMGB3P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB3P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB3P2 Gene:

HMGB3P2
genes like me logo Genes that share expression patterns with HMGB3P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB3P2 Gene

Orthologs for HMGB3P2 Gene

Evolution for HMGB3P2 Gene

ENSEMBL:
Gene Tree for HMGB3P2 (if available)
TreeFam:
Gene Tree for HMGB3P2 (if available)

No data available for Orthologs for HMGB3P2 Gene

Paralogs for HMGB3P2 Gene

No data available for Paralogs for HMGB3P2 Gene

Variants for HMGB3P2 Gene

Additional Variant Information for HMGB3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB3P2 Gene

Disorders for HMGB3P2 Gene

No disorders were found for HMGB3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB3P2 Gene

Publications for HMGB3P2 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGB3P2 Gene

Sources for HMGB3P2 Gene

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