Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HMGB3P17 Gene

Subcategory (RNA class) for HMGB3P17 Gene


Aliases for HMGB3P17 Gene

  • High Mobility Group Box 3 Pseudogene 17 2 3 5
  • High-Mobility Group Box 3 Pseudogene 17 2

External Ids for HMGB3P17 Gene

ORGUL Members for HMGB3P17 Gene

Previous GeneCards Identifiers for HMGB3P17 Gene

  • GC05M122805

Summaries for HMGB3P17 Gene

GeneCards Summary for HMGB3P17 Gene

HMGB3P17 (High Mobility Group Box 3 Pseudogene 17) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB3P17 Gene

Genomics for HMGB3P17 Gene

Regulatory Elements for HMGB3P17 Gene

Enhancers for HMGB3P17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F123510 0.6 ENCODE 16.4 -42.8 -42786 2.9 HDGF PKNOX1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 HMGB3P17 SNX2 ENSG00000260686 CSNK1G3 PRDM6 KRT18P16
GH05F124262 0.8 Ensembl ENCODE 16.2 -794.0 -793993 2.8 PKNOX1 KLF17 FEZF1 RAD21 ZNF2 ZNF121 SCRT2 ZNF263 ZNF645 ZEB2 ENSG00000249423 HMGB3P17 ENSG00000249112 GC05P124234 GC05P124377
GH05F123459 1.5 FANTOM5 Ensembl ENCODE 0.4 +8.8 8791 2.1 HDGF PKNOX1 ATF1 ZNF133 BRCA1 ZNF2 ZNF121 CREM ZNF362 SP3 KRT8P33 CEP120 HMGB3P17
GH05F123455 0.7 Ensembl ENCODE 0.4 +13.2 13167 1.4 CTCF PKNOX1 RAD21 YY1 ZNF316 HNF4G NFE2 MAFK NFE2L2 CEBPB HMGB3P17 CEP120
GH05F123454 0.7 Ensembl 0.4 +14.4 14429 0.4 BACH1 ZNF384 ZNF316 FOXK2 POLR2A ETV6 NFE2 FOS MAFK NFE2L2 HMGB3P17 CEP120
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGB3P17 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB3P17 Gene

123,468,598 bp from pter
123,469,429 bp from pter
832 bases
Minus strand

Genomic View for HMGB3P17 Gene

Genes around HMGB3P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB3P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB3P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB3P17 Gene

Proteins for HMGB3P17 Gene

Post-translational modifications for HMGB3P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB3P17 Gene

Domains & Families for HMGB3P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB3P17 Gene

Function for HMGB3P17 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB3P17 Gene

Localization for HMGB3P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB3P17 Gene

Pathways & Interactions for HMGB3P17 Gene

SuperPathways for HMGB3P17 Gene

No Data Available

Interacting Proteins for HMGB3P17 Gene

Gene Ontology (GO) - Biological Process for HMGB3P17 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGB3P17 Gene

Transcripts for HMGB3P17 Gene

mRNA/cDNA for HMGB3P17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB3P17 Gene

No ASD Table

Relevant External Links for HMGB3P17 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGB3P17 Gene

mRNA expression in normal human tissues for HMGB3P17 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB3P17 Gene:

genes like me logo Genes that share expression patterns with HMGB3P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGB3P17 Gene

Orthologs for HMGB3P17 Gene

Evolution for HMGB3P17 Gene

Gene Tree for HMGB3P17 (if available)
Gene Tree for HMGB3P17 (if available)

No data available for Orthologs for HMGB3P17 Gene

Paralogs for HMGB3P17 Gene

No data available for Paralogs for HMGB3P17 Gene

Variants for HMGB3P17 Gene

Relevant External Links for HMGB3P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB3P17 Gene

Disorders for HMGB3P17 Gene

No disorders were found for HMGB3P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB3P17 Gene

Publications for HMGB3P17 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGB3P17 Gene

Sources for HMGB3P17 Gene

Loading form....