Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HMGB3P16 Gene

Subcategory (RNA class) for HMGB3P16 Gene


Aliases for HMGB3P16 Gene

  • High Mobility Group Box 3 Pseudogene 16 2 3 5
  • High-Mobility Group Box 3 Pseudogene 16 2

External Ids for HMGB3P16 Gene

ORGUL Members for HMGB3P16 Gene

Previous GeneCards Identifiers for HMGB3P16 Gene

  • GC00U931458
  • GC05M111789

Summaries for HMGB3P16 Gene

GeneCards Summary for HMGB3P16 Gene

HMGB3P16 (High Mobility Group Box 3 Pseudogene 16) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB3P16 Gene

Genomics for HMGB3P16 Gene

Regulatory Elements for HMGB3P16 Gene

Enhancers for HMGB3P16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G112520 1 Ensembl ENCODE 0.2 -69.0 -68987 3.8 HDGF CTCF PKNOX1 KLF1 RAD21 ZBTB40 ARID3A POLR2A ZNF143 RELB EPB41L4A LOC100286958 HMGB3P16
GH05G112524 0.8 Ensembl 0.2 -71.3 -71312 0.2 ZNF223 RAD21 ZIC2 ZNF335 ZBTB48 POLR2A SCRT2 ZNF143 PRDM10 SCRT1 LOC100286958 HMGB3P16
GH05G112533 0.8 Ensembl ENCODE 0.2 -80.5 -80512 0.6 JUND HNF4A REST ATF2 LOC100286958 HMGB3P16
GH05G112474 0.5 FANTOM5 0.3 -21.3 -21332 0.2 JUND ATF3 HNF4A HMGB3P16 LOC100286958
GH05G112534 0.2 Ensembl 0.2 -81.3 -81312 0.2 LOC100286958 HMGB3P16
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGB3P16 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB3P16 Gene

112,452,703 bp from pter
112,452,989 bp from pter
287 bases
Minus strand

Genomic View for HMGB3P16 Gene

Genes around HMGB3P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB3P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB3P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB3P16 Gene

Proteins for HMGB3P16 Gene

Post-translational modifications for HMGB3P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB3P16 Gene

Domains & Families for HMGB3P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB3P16 Gene

Function for HMGB3P16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB3P16 Gene

Localization for HMGB3P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB3P16 Gene

Pathways & Interactions for HMGB3P16 Gene

SuperPathways for HMGB3P16 Gene

No Data Available

Interacting Proteins for HMGB3P16 Gene

Gene Ontology (GO) - Biological Process for HMGB3P16 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGB3P16 Gene

Drugs & Compounds for HMGB3P16 Gene

No Compound Related Data Available

Transcripts for HMGB3P16 Gene

mRNA/cDNA for HMGB3P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB3P16 Gene

No ASD Table

Relevant External Links for HMGB3P16 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGB3P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB3P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB3P16 Gene:

genes like me logo Genes that share expression patterns with HMGB3P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB3P16 Gene

Orthologs for HMGB3P16 Gene

Evolution for HMGB3P16 Gene

Gene Tree for HMGB3P16 (if available)
Gene Tree for HMGB3P16 (if available)

No data available for Orthologs for HMGB3P16 Gene

Paralogs for HMGB3P16 Gene

No data available for Paralogs for HMGB3P16 Gene

Variants for HMGB3P16 Gene

Relevant External Links for HMGB3P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB3P16 Gene

Disorders for HMGB3P16 Gene

No disorders were found for HMGB3P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB3P16 Gene

Publications for HMGB3P16 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGB3P16 Gene

Sources for HMGB3P16 Gene

Loading form....