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Aliases for HMGB3P13 Gene

Aliases for HMGB3P13 Gene

  • High Mobility Group Box 3 Pseudogene 13 2 3 5
  • High-Mobility Group Box 3 Pseudogene 13 2

External Ids for HMGB3P13 Gene

Previous GeneCards Identifiers for HMGB3P13 Gene

  • GC03P134158

Summaries for HMGB3P13 Gene

GeneCards Summary for HMGB3P13 Gene

HMGB3P13 (High Mobility Group Box 3 Pseudogene 13) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB3P13 Gene

Genomics for HMGB3P13 Gene

Regulatory Elements for HMGB3P13 Gene

Enhancers for HMGB3P13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F134426 1.4 FANTOM5 Ensembl ENCODE 0.4 -9.9 -9912 3.1 TBP MLX SIN3A RAD21 BRCA1 RARA RFX5 RCOR1 FOS SMARCC1 ANAPC13 HMGB3P13 HMGN1P9
GH03F134419 0.9 ENCODE 0.3 -17.7 -17735 0.7 ELF3 TBP ATF1 MLX ARID4B DMAP1 THRB ZNF48 RARA CREM HMGB3P13 HMGN1P9
GH03F134423 0.6 Ensembl 0.4 -14.2 -14202 0.2 SIX4 NFIA SMARCA4 ZBTB48 POLR2A GLIS1 ZNF644 ANAPC13 HMGB3P13 HMGN1P9
GH03F134404 0.8 Ensembl ENCODE 0.3 -31.2 -31229 3.9 CTCF SMARCA4 POLR2A CBX2 EZH2 HMGN1P9 HMGB3P13
GH03F134392 0.6 Ensembl ENCODE 0.2 -44.8 -44833 1.1 ZNF26 HMGN1P9 HMGB3P13
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGB3P13 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB3P13 Gene

Chromosome:
3
Start:
134,437,502 bp from pter
End:
134,438,388 bp from pter
Size:
887 bases
Orientation:
Plus strand

Genomic View for HMGB3P13 Gene

Genes around HMGB3P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB3P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB3P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB3P13 Gene

Proteins for HMGB3P13 Gene

Post-translational modifications for HMGB3P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB3P13 Gene

Domains & Families for HMGB3P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB3P13 Gene

Function for HMGB3P13 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB3P13 Gene

Localization for HMGB3P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB3P13 Gene

Pathways & Interactions for HMGB3P13 Gene

SuperPathways for HMGB3P13 Gene

No Data Available

Interacting Proteins for HMGB3P13 Gene

Gene Ontology (GO) - Biological Process for HMGB3P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB3P13 Gene

Transcripts for HMGB3P13 Gene

mRNA/cDNA for HMGB3P13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB3P13 Gene

No ASD Table

Relevant External Links for HMGB3P13 Gene

GeneLoc Exon Structure for
HMGB3P13
ECgene alternative splicing isoforms for
HMGB3P13

Expression for HMGB3P13 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB3P13 Gene:

HMGB3P13
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGB3P13 Gene

Orthologs for HMGB3P13 Gene

Evolution for HMGB3P13 Gene

ENSEMBL:
Gene Tree for HMGB3P13 (if available)
TreeFam:
Gene Tree for HMGB3P13 (if available)

No data available for Orthologs for HMGB3P13 Gene

Paralogs for HMGB3P13 Gene

No data available for Paralogs for HMGB3P13 Gene

Variants for HMGB3P13 Gene

Relevant External Links for HMGB3P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB3P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB3P13 Gene

Disorders for HMGB3P13 Gene

No disorders were found for HMGB3P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB3P13 Gene

Publications for HMGB3P13 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGB3P13 Gene

Sources for HMGB3P13 Gene

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