Aliases for HMGB2P1 Gene
Aliases for HMGB2P1 Gene
External Ids for HMGB2P1 Gene
- HGNC: 39174
- Entrez Gene: 729119
- Ensembl: ENSG00000267736
Previous GeneCards Identifiers for HMGB2P1 Gene
- GC19P001204
Summaries for HMGB2P1 Gene
GeneCards Summary for HMGB2P1 Gene
HMGB2P1 (High Mobility Group Box 2 Pseudogene 1) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB2P1 Gene
Genomics for HMGB2P1 Gene
Regulatory Elements for HMGB2P1 Gene
Enhancers for HMGB2P1 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH19G001202 | 1.7 | Ensembl ENCODE dbSUPER | 0.7 | +3.5 | 3548 | 8.0 | CREB3L1 MLX AGO1 ZFP64 FEZF1 YY1 SLC30A9 ZNF143 SP3 NFYC | CIRBP TMEM259 LOC100288123 MIER2 ENSG00000261526 POLRMT ENSG00000267317 SCAMP4 C19orf24 RPS15 |
| GH19G001194 | 1.5 | Ensembl ENCODE dbSUPER | 0.4 | -8.6 | -8603 | 1.2 | HDGF CREB3L1 ARNT SIN3A ZNF2 GLIS2 ZNF766 ELK1 ZNF207 ZNF143 | HMGB2P1 STK11 |
| GH19G001179 | 1.9 | FANTOM5 Ensembl ENCODE dbSUPER | 0.3 | -20.1 | -20066 | 6.8 | HDGF PKNOX1 MLX WRNIP1 ARID4B SIN3A DMAP1 YBX1 ZBTB7B ZNF143 | POLR2E ARHGAP45 MIER2 SBNO2 STK11 HMGB2P1 |
| GH19G001192 | 1.2 | Ensembl ENCODE dbSUPER | 0.4 | -10.4 | -10432 | 1.2 | KLF1 L3MBTL2 UBTF ZEB2 ZNF48 THRB ZEB1 ZFHX2 ZGPAT EGR1 | HMGB2P1 STK11 |
| GH19G001188 | 1.2 | Ensembl ENCODE dbSUPER | 0.4 | -13.6 | -13637 | 1.2 | KLF1 KLF17 YY1 ZNF316 ZFHX2 EGR1 FOS NFE2 TCF7L2 EGR2 | POLRMT MIER2 HMGB2P1 STK11 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around HMGB2P1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for HMGB2P1 Gene
- Chromosome:
- 19
- Start:
- 1,203,209 bp from pter
- End:
- 1,203,842 bp from pter
- Size:
- 634 bases
- Orientation:
- Plus strand
Genomic View for HMGB2P1 Gene
Genes around HMGB2P1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19p13.3 by Ensembl
- 19p13.3 by Entrez Gene
- 19p13.3 by HGNC
HMGB2P1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HMGB2P1 Gene
Proteins for HMGB2P1 Gene
Post-translational modifications for HMGB2P1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for HMGB2P1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HMGB2P1
- Origene Custom Protein Services for HMGB2P1
- Search GeneTex for Proteins for HMGB2P1
Assay Products
No data available for DME Specific Peptides for HMGB2P1 Gene
Domains & Families for HMGB2P1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB2P1 Gene
Function for HMGB2P1 Gene
Phenotypes for HMGB2P1 Gene
- GenomeRNAi human phenotypes for HMGB2P1:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HMGB2P1
CRISPR Products
- Browse CRISPR knockouts for HMGB2P1
miRNA Products
- Search ViGene Biosciences for HMGB2P1
Inhibitory RNA Products
- Search ViGene Biosciences for HMGB2P1
Cell Line Products
- Search ViGene Biosciences for HMGB2P1
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB2P1 Gene
Localization for HMGB2P1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB2P1 Gene
Transcripts for HMGB2P1 Gene
mRNA/cDNA for HMGB2P1 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for HMGB2P1
miRNA Products
- Search ViGene Biosciences for HMGB2P1
Inhibitory RNA Products
- Search ViGene Biosciences for HMGB2P1
Flow Cytometry Products
Expression for HMGB2P1 Gene
mRNA differential expression in normal tissues according to GTEx for HMGB2P1 Gene
This gene is overexpressed in Testis (x8.5).
NURSA nuclear receptor signaling pathways regulating expression of HMGB2P1 Gene:
HMGB2P1Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB2P1 Gene
Orthologs for HMGB2P1 Gene
No data available for Orthologs for HMGB2P1 Gene
Paralogs for HMGB2P1 Gene
No data available for Paralogs for HMGB2P1 Gene
Variants for HMGB2P1 Gene
Relevant External Links for HMGB2P1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HMGB2P1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB2P1 Gene
Disorders for HMGB2P1 Gene
No disorders were found for HMGB2P1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB2P1 Gene
Publications for HMGB2P1 Gene
No publications were found for HMGB2P1 Gene.
Products for HMGB2P1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HMGB2P1
- Origene Custom Protein Services for HMGB2P1
- Browse OriGene Inhibitory RNA Products For HMGB2P1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for HMGB2P1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HMGB2P1
- GenScript: Custom all cDNA clones Services for HMGB2P1
- GenScript Custom Purified and Recombinant Proteins Services for HMGB2P1
- GenScript Custom Assay Services for HMGB2P1
- GenScript Custom overexpressing Cell Line Services for HMGB2P1
- Browse GenScript CRISPR for HMGB2P1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for HMGB2P1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HMGB2P1
- VectorBuilder custom plasmid, inducible vectors for HMGB2P1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HMGB2P1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HMGB2P1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer