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Aliases for HMGB2P1 Gene

Aliases for HMGB2P1 Gene

  • High Mobility Group Box 2 Pseudogene 1 2 3 5
  • High-Mobility Group Box 2 Pseudogene 1 2

External Ids for HMGB2P1 Gene

Previous GeneCards Identifiers for HMGB2P1 Gene

  • GC19P001204

Summaries for HMGB2P1 Gene

GeneCards Summary for HMGB2P1 Gene

HMGB2P1 (High Mobility Group Box 2 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB2P1 Gene

Genomics for HMGB2P1 Gene

Regulatory Elements for HMGB2P1 Gene

Enhancers for HMGB2P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F001202 1 Ensembl ENCODE 0.8 +3.5 3548 8.0 MLX CREB3L1 ZFP64 FEZF1 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D CIRBP TMEM259 LOC100288123 GRIN3B SCAMP4 ENSG00000261526 ENSG00000267317 MIER2 POLRMT C19orf24
GH19F001194 0.9 Ensembl ENCODE 0.4 -8.6 -8603 1.2 HDGF ARNT CREB3L1 SIN3A ZNF2 ZNF766 GLIS2 ELK1 ZNF207 ZNF143 HMGB2P1 STK11
GH19F001211 1 Ensembl ENCODE 0.4 +8.6 8561 1.2 CTCF PKNOX1 ZIC2 YY1 ZFHX2 POLR2A SCRT2 EGR2 SCRT1 SP3 ATP5D WDR18 PIR41652 HMGB2P1
GH19F001192 0.7 Ensembl ENCODE 0.4 -10.5 -10509 1.4 KLF1 L3MBTL2 UBTF ZEB2 THRB ZNF48 ZEB1 ZFHX2 ZGPAT POLR2A HMGB2P1 STK11
GH19F001188 1.1 Ensembl ENCODE 0.4 -13.6 -13637 1.2 KLF1 KLF17 DPF2 TBX21 ZBTB7A ZNF316 JUND ZFHX2 IKZF1 ZBTB33 POLRMT MIER2 HMGB2P1 STK11
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGB2P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB2P1 Gene

Chromosome:
19
Start:
1,203,209 bp from pter
End:
1,203,842 bp from pter
Size:
634 bases
Orientation:
Plus strand

Genomic View for HMGB2P1 Gene

Genes around HMGB2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB2P1 Gene

Proteins for HMGB2P1 Gene

Post-translational modifications for HMGB2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB2P1 Gene

Domains & Families for HMGB2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB2P1 Gene

Function for HMGB2P1 Gene

Phenotypes for HMGB2P1 Gene

GenomeRNAi human phenotypes for HMGB2P1:
genes like me logo Genes that share phenotypes with HMGB2P1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB2P1 Gene

Localization for HMGB2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB2P1 Gene

Pathways & Interactions for HMGB2P1 Gene

SuperPathways for HMGB2P1 Gene

No Data Available

Interacting Proteins for HMGB2P1 Gene

Gene Ontology (GO) - Biological Process for HMGB2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB2P1 Gene

Transcripts for HMGB2P1 Gene

mRNA/cDNA for HMGB2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB2P1 Gene

No ASD Table

Relevant External Links for HMGB2P1 Gene

GeneLoc Exon Structure for
HMGB2P1
ECgene alternative splicing isoforms for
HMGB2P1

Expression for HMGB2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGB2P1 Gene

mRNA differential expression in normal tissues according to GTEx for HMGB2P1 Gene

This gene is overexpressed in Testis (x8.5).

NURSA nuclear receptor signaling pathways regulating expression of HMGB2P1 Gene:

HMGB2P1
genes like me logo Genes that share expression patterns with HMGB2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGB2P1 Gene

Orthologs for HMGB2P1 Gene

Evolution for HMGB2P1 Gene

ENSEMBL:
Gene Tree for HMGB2P1 (if available)
TreeFam:
Gene Tree for HMGB2P1 (if available)

No data available for Orthologs for HMGB2P1 Gene

Paralogs for HMGB2P1 Gene

No data available for Paralogs for HMGB2P1 Gene

Variants for HMGB2P1 Gene

Relevant External Links for HMGB2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB2P1 Gene

Disorders for HMGB2P1 Gene

No disorders were found for HMGB2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB2P1 Gene

Publications for HMGB2P1 Gene

No publications were found for HMGB2P1 Gene.

Products for HMGB2P1 Gene

Sources for HMGB2P1 Gene

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