Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HMGB1P9 Gene

Aliases for HMGB1P9 Gene

  • High Mobility Group Box 1 Pseudogene 9 2 3 5
  • High-Mobility Group (Nonhistone Chromosomal) Protein 1-Like 9 2 3
  • High-Mobility Group Box 1-Like 9 2 3
  • High-Mobility Group Box 1 Pseudogene 9 2
  • HMGB1L9 3
  • HMG1L9 3

External Ids for HMGB1P9 Gene

Previous HGNC Symbols for HMGB1P9 Gene

  • HMG1L9
  • HMGB1L9

Previous GeneCards Identifiers for HMGB1P9 Gene

  • GC02P219066

Summaries for HMGB1P9 Gene

GeneCards Summary for HMGB1P9 Gene

HMGB1P9 (High Mobility Group Box 1 Pseudogene 9) is a Pseudogene.

Additional gene information for HMGB1P9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P9 Gene

Genomics for HMGB1P9 Gene

GeneHancer (GH) Regulatory Elements for HMGB1P9 Gene

Promoters and enhancers for HMGB1P9 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I218186 Enhancer 1 Ensembl ENCODE 0.4 -12.8 -12768 2.3 ELF3 SIN3A RAD21 ZNF143 IKZF2 THAP11 ZNF654 ZBTB11 REST ELF1 ENSG00000261338 ARPC2 PNKD AAMP GPBAR1 HMGB1P9 CXCR1
GH02I218166 Promoter/Enhancer 1 EPDnew Ensembl ENCODE 0.3 -33.1 -33142 1.5 CTCF CXCR1 ARPC2 GPBAR1 HMGB1P9
GH02I218180 Enhancer 0.6 ENCODE 0.4 -19.2 -19231 1.6 PKNOX1 ZNF316 TAF9B HLF MAFG CBFA2T3 NFE2 EMSY ENSG00000261338 ARPC2 GPBAR1 AAMP CXCR1 HMGB1P9
GH02I218169 Enhancer 0.6 ENCODE 0.3 -30.4 -30439 1.2 CTCF SRF RFX1 RXRA TRIM22 BMI1 RAD21 YY1 RELA RFX3 ARPC2 CXCR1 HMGB1P9
GH02I218168 Enhancer 0.6 ENCODE 0.3 -31.2 -31213 0.2 CTCF ZNF654 ZNF133 TRIM22 EBF1 RAD21 RELA ZNF143 ARPC2 CXCR1 HMGB1P9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGB1P9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGB1P9 Gene

Genomic Locations for HMGB1P9 Gene
1,575 bases
Plus strand

Genomic View for HMGB1P9 Gene

Genes around HMGB1P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P9 Gene

Proteins for HMGB1P9 Gene

Post-translational modifications for HMGB1P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P9 Gene

Domains & Families for HMGB1P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P9 Gene

Function for HMGB1P9 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P9 Gene

Localization for HMGB1P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB1P9 Gene

Pathways & Interactions for HMGB1P9 Gene

SuperPathways for HMGB1P9 Gene

No Data Available

Interacting Proteins for HMGB1P9 Gene

Gene Ontology (GO) - Biological Process for HMGB1P9 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGB1P9 Gene

Drugs & Compounds for HMGB1P9 Gene

No Compound Related Data Available

Transcripts for HMGB1P9 Gene

mRNA/cDNA for HMGB1P9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P9 Gene

No ASD Table

Relevant External Links for HMGB1P9 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGB1P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB1P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P9 Gene:

genes like me logo Genes that share expression patterns with HMGB1P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB1P9 Gene

Orthologs for HMGB1P9 Gene

Evolution for HMGB1P9 Gene

Gene Tree for HMGB1P9 (if available)
Gene Tree for HMGB1P9 (if available)

No data available for Orthologs for HMGB1P9 Gene

Paralogs for HMGB1P9 Gene

No data available for Paralogs for HMGB1P9 Gene

Variants for HMGB1P9 Gene

Additional Variant Information for HMGB1P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P9 Gene

Disorders for HMGB1P9 Gene

No disorders were found for HMGB1P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P9 Gene

Publications for HMGB1P9 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGB1P9 Gene

Sources for HMGB1P9 Gene

Loading form....