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Aliases for HMGB1P7 Gene

Subcategory (RNA class) for HMGB1P7 Gene

antisense

Aliases for HMGB1P7 Gene

  • High Mobility Group Box 1 Pseudogene 7 2 3 5
  • High-Mobility Group Box 1 Pseudogene 7 2

External Ids for HMGB1P7 Gene

ORGUL Members for HMGB1P7 Gene

Previous GeneCards Identifiers for HMGB1P7 Gene

  • GC10P032203

Summaries for HMGB1P7 Gene

GeneCards Summary for HMGB1P7 Gene

HMGB1P7 (High Mobility Group Box 1 Pseudogene 7) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for HMGB1P7 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P7 Gene

Genomics for HMGB1P7 Gene

Regulatory Elements for HMGB1P7 Gene

Enhancers for HMGB1P7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H031925 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +15.3 15334 5 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 KIF5B ENSG00000226842 EPC1 ZEB1-AS1 ARHGAP12 HMGB1P7
GH10H031912 1 Ensembl ENCODE 0.7 -0.2 -187 1 SOX13 TAL1 ARID4B FOSL1 ZNF316 MAFK SOX5 NFIA FOXA3 ZEB2 KIF5B ENSG00000206660 ARHGAP12 HMGB1P7 ENSG00000222412
GH10H031896 0.9 Ensembl ENCODE 0.4 -15.6 -15646 2 USF2 FEZF1 EP300 ZNF843 JUND PRDM6 ZNF26 HMBOX1 WT1 SP7 HMGB1P7 ENSG00000222412
GH10H031862 1.1 Ensembl ENCODE 0.2 -50.6 -50642 0 HDAC1 PKNOX1 ATF1 ZSCAN4 ARID4B SIN3A RAD21 GATA2 ZNF143 RUNX3 KIF5B ARHGAP12 HMGB1P7 ENSG00000222412
GH10H031863 1.1 Ensembl ENCODE 0.2 -46.6 -46621 5 ELF3 SOX13 FOXA2 SAP130 JUN ARID4B CEBPG FEZF1 ZIC2 RFX5 KIF5B ARHGAP12 HMGB1P7 ENSG00000222412
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGB1P7 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB1P7 Gene

Chromosome:
10
Start:
31,913,143 bp from pter
End:
31,913,754 bp from pter
Size:
612 bases
Orientation:
Plus strand

Genomic View for HMGB1P7 Gene

Genes around HMGB1P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P7 Gene

Proteins for HMGB1P7 Gene

Post-translational modifications for HMGB1P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P7 Gene

Domains & Families for HMGB1P7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P7 Gene

Function for HMGB1P7 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGB1P7
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P7 Gene

Localization for HMGB1P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB1P7 Gene

Pathways & Interactions for HMGB1P7 Gene

SuperPathways for HMGB1P7 Gene

No Data Available

Interacting Proteins for HMGB1P7 Gene

Gene Ontology (GO) - Biological Process for HMGB1P7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB1P7 Gene

Drugs & Compounds for HMGB1P7 Gene

No Compound Related Data Available

Transcripts for HMGB1P7 Gene

mRNA/cDNA for HMGB1P7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGB1P7
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P7 Gene

No ASD Table

Relevant External Links for HMGB1P7 Gene

GeneLoc Exon Structure for
HMGB1P7
ECgene alternative splicing isoforms for
HMGB1P7

Expression for HMGB1P7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB1P7 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P7 Gene:

HMGB1P7
genes like me logo Genes that share expression patterns with HMGB1P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB1P7 Gene

Orthologs for HMGB1P7 Gene

Evolution for HMGB1P7 Gene

ENSEMBL:
Gene Tree for HMGB1P7 (if available)
TreeFam:
Gene Tree for HMGB1P7 (if available)

No data available for Orthologs for HMGB1P7 Gene

Paralogs for HMGB1P7 Gene

No data available for Paralogs for HMGB1P7 Gene

Variants for HMGB1P7 Gene

Relevant External Links for HMGB1P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB1P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P7 Gene

Disorders for HMGB1P7 Gene

No disorders were found for HMGB1P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P7 Gene

Publications for HMGB1P7 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 60

Products for HMGB1P7 Gene

Sources for HMGB1P7 Gene

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