Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HMGB1P6 Gene

Aliases for HMGB1P6 Gene

  • High Mobility Group Box 1 Pseudogene 6 2 3 5
  • High-Mobility Group (Nonhistone Chromosomal) Protein 1-Like 6 Pseudogene 2 3
  • High-Mobility Group Box 1-Like 6 2 3
  • High-Mobility Group (Nonhistone Chromosomal) Protein 1-Like 6 2
  • High-Mobility Group Box 1 Pseudogene 6 2
  • HMGB1L6 3
  • HMG1L6 3

External Ids for HMGB1P6 Gene

Previous HGNC Symbols for HMGB1P6 Gene

  • HMG1L6
  • HMGB1L6

Previous GeneCards Identifiers for HMGB1P6 Gene

  • GC15M071456

Summaries for HMGB1P6 Gene

GeneCards Summary for HMGB1P6 Gene

HMGB1P6 (High Mobility Group Box 1 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P6 Gene

Genomics for HMGB1P6 Gene

Regulatory Elements for HMGB1P6 Gene

Enhancers for HMGB1P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G071745 1.3 Ensembl ENCODE 19.4 -581.9 -581905 3.5 PKNOX1 FOXA2 MLX SIN3A FEZF1 ZNF2 ZNF143 FOS ZHX2 ZNF592 HMGB1P6 LRRC49 NR2E3 ENSG00000261187 ENSG00000259744 THAP10 THSD4-AS2
GH15G070503 2 FANTOM5 Ensembl ENCODE dbSUPER 10.3 +658.8 658776 7.1 PKNOX1 FOXA2 WRNIP1 SIN3A FEZF1 ZNF2 YY1 ZNF416 FOS DEK TLE3 MIR629 HMGB1P6 LINC02205 PIR55212
GH15G070491 2 FANTOM5 Ensembl ENCODE dbSUPER 10.3 +671.7 671663 5.6 HDGF PKNOX1 FOXA2 ARID4B SIN3A FEZF1 ZNF2 ZNF766 ZNF416 FOS TLE3 LRRC49 THAP10 HMGB1P6 MIR629 LINC02205 PIR51135
GH15G071277 1.9 FANTOM5 Ensembl ENCODE dbSUPER 10.4 -114.8 -114789 5.3 PKNOX1 FOXA2 ARNT SIN3A FEZF1 ZNF2 YY1 ZNF302 FOS ZNF263 LOC105370887 HMGB1P6 LOC105370884 PIR52996
GH15G070269 1.5 FANTOM5 Ensembl ENCODE 10.8 +894.6 894614 2.3 FEZF1 BRCA1 FOS DEK ZNF263 ZNF518A MAFF STAT3 HNF4A SP7 HMGB1P6 ENSG00000259744 MIR629 GC15P070279 GC15P070262
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGB1P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB1P6 Gene

71,163,472 bp from pter
71,165,512 bp from pter
2,041 bases
Minus strand

Genomic View for HMGB1P6 Gene

Genes around HMGB1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P6 Gene

Proteins for HMGB1P6 Gene

Post-translational modifications for HMGB1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P6 Gene

Domains & Families for HMGB1P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P6 Gene

Function for HMGB1P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P6 Gene

Localization for HMGB1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB1P6 Gene

Pathways & Interactions for HMGB1P6 Gene

SuperPathways for HMGB1P6 Gene

No Data Available

Interacting Proteins for HMGB1P6 Gene

Gene Ontology (GO) - Biological Process for HMGB1P6 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGB1P6 Gene

Drugs & Compounds for HMGB1P6 Gene

No Compound Related Data Available

Transcripts for HMGB1P6 Gene

mRNA/cDNA for HMGB1P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P6 Gene

No ASD Table

Relevant External Links for HMGB1P6 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGB1P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB1P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P6 Gene:

genes like me logo Genes that share expression patterns with HMGB1P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB1P6 Gene

Orthologs for HMGB1P6 Gene

Evolution for HMGB1P6 Gene

Gene Tree for HMGB1P6 (if available)
Gene Tree for HMGB1P6 (if available)

No data available for Orthologs for HMGB1P6 Gene

Paralogs for HMGB1P6 Gene

No data available for Paralogs for HMGB1P6 Gene

Variants for HMGB1P6 Gene

Relevant External Links for HMGB1P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P6 Gene

Disorders for HMGB1P6 Gene

No disorders were found for HMGB1P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P6 Gene

Publications for HMGB1P6 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
  2. Mapping and molecular characterization of five HMG1-related DNA sequences. (PMID: 9925949) Rogalla P. … Bullerdiek J. (Cytogenet. Cell Genet. 1998) 2 3 64

Products for HMGB1P6 Gene

Sources for HMGB1P6 Gene

Loading form....