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Aliases for HMGB1P6 Gene

Aliases for HMGB1P6 Gene

  • High Mobility Group Box 1 Pseudogene 6 2 3 5
  • High-Mobility Group (Nonhistone Chromosomal) Protein 1-Like 6 Pseudogene 2 3
  • High-Mobility Group Box 1-Like 6 2 3
  • High-Mobility Group (Nonhistone Chromosomal) Protein 1-Like 6 2
  • High-Mobility Group Box 1 Pseudogene 6 2
  • HMGB1L6 3
  • HMG1L6 3

External Ids for HMGB1P6 Gene

Previous HGNC Symbols for HMGB1P6 Gene

  • HMG1L6
  • HMGB1L6

Previous GeneCards Identifiers for HMGB1P6 Gene

  • GC15M071456

Summaries for HMGB1P6 Gene

GeneCards Summary for HMGB1P6 Gene

HMGB1P6 (High Mobility Group Box 1 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P6 Gene

Genomics for HMGB1P6 Gene

Regulatory Elements for HMGB1P6 Gene

Enhancers for HMGB1P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15F071277 1.7 FANTOM5 Ensembl ENCODE 10.4 -114.8 -114789 5.3 PKNOX1 ZNF133 SIN3A FEZF1 BRCA1 ZNF2 YY1 GLIS2 ZNF302 ELK1 LOC105370887 HMGB1P6 LOC105370884 PIR52996
GH15F070501 1.7 FANTOM5 Ensembl ENCODE 10.3 +659.6 659556 8.7 PKNOX1 WRNIP1 SIN3A FEZF1 ZNF2 YY1 ZNF416 FOS DEK ZNF263 TLE3 MIR629 HMGB1P6 RPL17P39 LOC105370880 PIR51135
GH15F070490 1.7 FANTOM5 Ensembl ENCODE 10.3 +672.0 671983 6.3 HDGF PKNOX1 ARID4B SIN3A FEZF1 ZNF2 ZNF416 FOS ZNF263 SP3 TLE3 HMGB1P6 MIR629 LOC105370880 PIR51135
GH15F071292 1.3 Ensembl ENCODE 10.4 -130.7 -130663 6.4 PKNOX1 ZNF493 SIN3A BRCA1 GTF3C2 FOS SP3 ZHX2 TSHZ1 SMARCB1 LOC105370887 RPL17P39 HMGB1P6 LOC105370884 PIR52996
GH15F071745 1.3 Ensembl ENCODE 10.3 -581.9 -581905 3.5 PKNOX1 MLX SIN3A FEZF1 ZNF2 ZNF143 FOS ZHX2 ZNF592 SREBF1 LOC105370888 ARIH1 ENSG00000260672 THAP10 ENSG00000261187 LRRC49 LOC105370887 HEXA NR2E3 RPL17P39
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGB1P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB1P6 Gene

71,163,472 bp from pter
71,165,512 bp from pter
2,041 bases
Minus strand

Genomic View for HMGB1P6 Gene

Genes around HMGB1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P6 Gene

Proteins for HMGB1P6 Gene

Post-translational modifications for HMGB1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P6 Gene

Domains & Families for HMGB1P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P6 Gene

Function for HMGB1P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P6 Gene

Localization for HMGB1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB1P6 Gene

Pathways & Interactions for HMGB1P6 Gene

SuperPathways for HMGB1P6 Gene

No Data Available

Interacting Proteins for HMGB1P6 Gene

Gene Ontology (GO) - Biological Process for HMGB1P6 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGB1P6 Gene

Transcripts for HMGB1P6 Gene

mRNA/cDNA for HMGB1P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P6 Gene

No ASD Table

Relevant External Links for HMGB1P6 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGB1P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGB1P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P6 Gene:

genes like me logo Genes that share expression patterns with HMGB1P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGB1P6 Gene

Orthologs for HMGB1P6 Gene

Evolution for HMGB1P6 Gene

Gene Tree for HMGB1P6 (if available)
Gene Tree for HMGB1P6 (if available)

No data available for Orthologs for HMGB1P6 Gene

Paralogs for HMGB1P6 Gene

No data available for Paralogs for HMGB1P6 Gene

Variants for HMGB1P6 Gene

Relevant External Links for HMGB1P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P6 Gene

Disorders for HMGB1P6 Gene

No disorders were found for HMGB1P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P6 Gene

Publications for HMGB1P6 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
  2. Mapping and molecular characterization of five HMG1-related DNA sequences. (PMID: 9925949) Rogalla P. … Bullerdiek J. (Cytogenet. Cell Genet. 1998) 2 3 64

Products for HMGB1P6 Gene

Sources for HMGB1P6 Gene

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