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Aliases for HMGB1P5 Gene

Aliases for HMGB1P5 Gene

  • High Mobility Group Box 1 Pseudogene 5 2 3 5
  • High-Mobility Group (Nonhistone Chromosomal) Protein 1-Like 5 Pseudogene 2 3
  • High-Mobility Group Box 1-Like 5 Pseudogene 2 3
  • High-Mobility Group Box 1 Pseudogene 2 2 3
  • High-Mobility Group Box 1 Pseudogene 5 2 3
  • High-Mobility Group Box 1-Like 15 2 3
  • High-Mobility Group (Nonhistone Chromosomal) Protein 1-Like 5 2
  • High-Mobility Group Box 1-Like 5 2
  • HMGB1L15 3
  • HMGB1L5 3
  • HMGB1P2 3
  • HMG1L5 3
  • HMG-1 3

External Ids for HMGB1P5 Gene

Previous HGNC Symbols for HMGB1P5 Gene

  • HMG1L5
  • HMGB1L15
  • HMGB1P2
  • HMGB1L5

Summaries for HMGB1P5 Gene

GeneCards Summary for HMGB1P5 Gene

HMGB1P5 (High Mobility Group Box 1 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P5 Gene

Genomics for HMGB1P5 Gene

Regulatory Elements for HMGB1P5 Gene

Promoters for HMGB1P5 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around HMGB1P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB1P5 Gene

Chromosome:
3
Start:
22,381,670 bp from pter
End:
22,382,929 bp from pter
Size:
1,260 bases
Orientation:
Plus strand

Genomic View for HMGB1P5 Gene

Genes around HMGB1P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P5 Gene

Proteins for HMGB1P5 Gene

Post-translational modifications for HMGB1P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P5 Gene

Domains & Families for HMGB1P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P5 Gene

Function for HMGB1P5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P5 Gene

Localization for HMGB1P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB1P5 Gene

Pathways & Interactions for HMGB1P5 Gene

SuperPathways for HMGB1P5 Gene

No Data Available

Interacting Proteins for HMGB1P5 Gene

Gene Ontology (GO) - Biological Process for HMGB1P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB1P5 Gene

Drugs & Compounds for HMGB1P5 Gene

No Compound Related Data Available

Transcripts for HMGB1P5 Gene

mRNA/cDNA for HMGB1P5 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P5 Gene

No ASD Table

Relevant External Links for HMGB1P5 Gene

GeneLoc Exon Structure for
HMGB1P5
ECgene alternative splicing isoforms for
HMGB1P5

Expression for HMGB1P5 Gene

mRNA expression in normal human tissues for HMGB1P5 Gene

Protein differential expression in normal tissues from HIPED for HMGB1P5 Gene

This gene is overexpressed in Heart (45.4) and Brain (20.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from for HMGB1P5 Gene



genes like me logo Genes that share expression patterns with HMGB1P5: view

Protein tissue co-expression partners for HMGB1P5 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for HMGB1P5 Gene

Orthologs for HMGB1P5 Gene

Evolution for HMGB1P5 Gene

ENSEMBL:
Gene Tree for HMGB1P5 (if available)
TreeFam:
Gene Tree for HMGB1P5 (if available)

No data available for Orthologs for HMGB1P5 Gene

Paralogs for HMGB1P5 Gene

No data available for Paralogs for HMGB1P5 Gene

Variants for HMGB1P5 Gene

Relevant External Links for HMGB1P5 Gene

HapMap Linkage Disequilibrium report
HMGB1P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P5 Gene

Disorders for HMGB1P5 Gene

No disorders were found for HMGB1P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P5 Gene

Publications for HMGB1P5 Gene

  1. Mapping and molecular characterization of five HMG1-related DNA sequences. (PMID: 9925949) Rogalla P. … Bullerdiek J. (Cytogenet. Cell Genet. 1998) 2 3 67
  2. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I. … Wright H. (Nature 1999) 3
  3. A retropseudogene for non-histone chromosomal protein HMG-1. (PMID: 8439568) Stros M. … Dixon G.H. (Biochim. Biophys. Acta 1993) 3

Products for HMGB1P5 Gene

Sources for HMGB1P5 Gene

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