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Aliases for HMGB1P46 Gene

Aliases for HMGB1P46 Gene

  • High Mobility Group Box 1 Pseudogene 46 2 3 5
  • High-Mobility Group Box 1 Pseudogene 46 2

External Ids for HMGB1P46 Gene

Previous GeneCards Identifiers for HMGB1P46 Gene

  • GC08M108185

Summaries for HMGB1P46 Gene

GeneCards Summary for HMGB1P46 Gene

HMGB1P46 (High Mobility Group Box 1 Pseudogene 46) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P46 Gene

Genomics for HMGB1P46 Gene

Regulatory Elements for HMGB1P46 Gene

Enhancers for HMGB1P46 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F107222 1.4 FANTOM5 Ensembl ENCODE 0.2 -49.7 -49725 1.5 JUN BHLHE40 CEBPB EP300 NR2F2 ZNF316 JUND MAFF ATF3 STAT3 HMGB1P46 GC08M107315
GH08F107224 0.9 Ensembl ENCODE 0.2 -51.8 -51808 1.4 HMGB1P46 GC08M107315
GH08F107240 0.2 Ensembl 0.2 -67.2 -67192 0.4 HMGB1P46 GC08M107315
GH08F107314 0.8 Ensembl ENCODE 0.1 -141.3 -141308 1.8 ARID1B SMARCA4 IKZF1 NBN FOXP2 ZSCAN29 TBX21 GC08M107315 HMGB1P46
GH08F107304 1.5 FANTOM5 Ensembl ENCODE 0.1 -131.7 -131749 1.6 TBL1XR1 ELK1 CREM NCOA1 MEF2D SMARCA4 PBX2 IKZF1 HMBOX1 MYC GC08M107315 HMGB1P46
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGB1P46 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB1P46 Gene

107,173,199 bp from pter
107,173,809 bp from pter
611 bases
Minus strand

Genomic View for HMGB1P46 Gene

Genes around HMGB1P46 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P46 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P46 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P46 Gene

Proteins for HMGB1P46 Gene

Post-translational modifications for HMGB1P46 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P46 Gene

Domains & Families for HMGB1P46 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P46 Gene

Function for HMGB1P46 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P46 Gene

Localization for HMGB1P46 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB1P46 Gene

Pathways & Interactions for HMGB1P46 Gene

SuperPathways for HMGB1P46 Gene

No Data Available

Interacting Proteins for HMGB1P46 Gene

Gene Ontology (GO) - Biological Process for HMGB1P46 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGB1P46 Gene

Transcripts for HMGB1P46 Gene

mRNA/cDNA for HMGB1P46 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P46 Gene

No ASD Table

Relevant External Links for HMGB1P46 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGB1P46 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGB1P46 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P46 Gene:

genes like me logo Genes that share expression patterns with HMGB1P46: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGB1P46 Gene

Orthologs for HMGB1P46 Gene

Evolution for HMGB1P46 Gene

Gene Tree for HMGB1P46 (if available)
Gene Tree for HMGB1P46 (if available)

No data available for Orthologs for HMGB1P46 Gene

Paralogs for HMGB1P46 Gene

No data available for Paralogs for HMGB1P46 Gene

Variants for HMGB1P46 Gene

Relevant External Links for HMGB1P46 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P46 Gene

Disorders for HMGB1P46 Gene

No disorders were found for HMGB1P46 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P46 Gene

Publications for HMGB1P46 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGB1P46 Gene

Sources for HMGB1P46 Gene

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