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Aliases for HMGB1P44 Gene

Subcategory (RNA class) for HMGB1P44 Gene

lncRNA

Aliases for HMGB1P44 Gene

  • High Mobility Group Box 1 Pseudogene 44 2 3 5
  • High-Mobility Group Box 1 Pseudogene 44 2

External Ids for HMGB1P44 Gene

ORGUL Members for HMGB1P44 Gene

Previous GeneCards Identifiers for HMGB1P44 Gene

  • GC04P078886

Summaries for HMGB1P44 Gene

GeneCards Summary for HMGB1P44 Gene

HMGB1P44 (High Mobility Group Box 1 Pseudogene 44) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P44 Gene

Genomics for HMGB1P44 Gene

Regulatory Elements for HMGB1P44 Gene

Enhancers for HMGB1P44 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G077851 2 FANTOM5 Ensembl ENCODE dbSUPER 5 -110.2 -110198 4.0 PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 FEZF1 ZNF2 ZBTB7B YY1 ZNF766 CNOT6L HMGB1P44 MRPL1
GH04G077920 1.4 Ensembl ENCODE dbSUPER 4.7 -41.8 -41808 3.8 ELF3 FOXA2 ATF1 MLX DMAP1 DNMT3B RARA GATA2 FOS MIXL1 CNOT6L HMGB1P44 LOC102724916 ENSG00000250214
GH04G077826 0.9 ENCODE dbSUPER 7.2 -136.2 -136243 2.0 CTCF PKNOX1 RNF2 NR2F1 TRIM22 TBX21 POLR2H ZNF664 ARID3A EED CNOT6L HMGB1P44 MRPL1
GH04G077880 0.9 ENCODE 4.9 -82.2 -82159 2.6 ELF3 FOXA2 ARID4B RAD21 RARA FOS THAP11 CEBPB KAT8 ZNF592 CNOT6L FRAS1 HMGB1P44 ENSG00000250214 LOC102724916
GH04G077930 0.7 ENCODE dbSUPER 4.8 -32.2 -32242 1.9 JUN FOS ZZZ3 CNOT6L HMGB1P44 LOC102724916 ENSG00000250214
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGB1P44 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB1P44 Gene

Chromosome:
4
Start:
77,963,940 bp from pter
End:
77,964,530 bp from pter
Size:
591 bases
Orientation:
Plus strand

Genomic View for HMGB1P44 Gene

Genes around HMGB1P44 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P44 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P44 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P44 Gene

Proteins for HMGB1P44 Gene

Post-translational modifications for HMGB1P44 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P44 Gene

Domains & Families for HMGB1P44 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P44 Gene

Function for HMGB1P44 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P44 Gene

Localization for HMGB1P44 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB1P44 Gene

Pathways & Interactions for HMGB1P44 Gene

SuperPathways for HMGB1P44 Gene

No Data Available

Interacting Proteins for HMGB1P44 Gene

Gene Ontology (GO) - Biological Process for HMGB1P44 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB1P44 Gene

Drugs & Compounds for HMGB1P44 Gene

No Compound Related Data Available

Transcripts for HMGB1P44 Gene

mRNA/cDNA for HMGB1P44 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P44 Gene

No ASD Table

Relevant External Links for HMGB1P44 Gene

GeneLoc Exon Structure for
HMGB1P44
ECgene alternative splicing isoforms for
HMGB1P44

Expression for HMGB1P44 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB1P44 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P44 Gene:

HMGB1P44
genes like me logo Genes that share expression patterns with HMGB1P44: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB1P44 Gene

Orthologs for HMGB1P44 Gene

Evolution for HMGB1P44 Gene

ENSEMBL:
Gene Tree for HMGB1P44 (if available)
TreeFam:
Gene Tree for HMGB1P44 (if available)

No data available for Orthologs for HMGB1P44 Gene

Paralogs for HMGB1P44 Gene

No data available for Paralogs for HMGB1P44 Gene

Variants for HMGB1P44 Gene

Relevant External Links for HMGB1P44 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB1P44

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P44 Gene

Disorders for HMGB1P44 Gene

No disorders were found for HMGB1P44 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P44 Gene

Publications for HMGB1P44 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGB1P44 Gene

Sources for HMGB1P44 Gene

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