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Aliases for HMGB1P4 Gene

Aliases for HMGB1P4 Gene

  • High Mobility Group Box 1 Pseudogene 4 2 3 5
  • High-Mobility Group (Nonhistone Chromosomal) Protein 1-Like 4 Pseudogene 2 3
  • High-Mobility Group Box 1-Like 4 2 3
  • High-Mobility Group (Nonhistone Chromosomal) Protein 1-Like 4 2
  • High-Mobility Group Box 1 Pseudogene 4 2
  • HMG1L4P 3
  • HMGB1L4 3
  • HMG1L4 3

External Ids for HMGB1P4 Gene

Previous HGNC Symbols for HMGB1P4 Gene

  • HMG1L4
  • HMG1L4P
  • HMGB1L4

Previous GeneCards Identifiers for HMGB1P4 Gene

  • GC02M171460

Summaries for HMGB1P4 Gene

GeneCards Summary for HMGB1P4 Gene

HMGB1P4 (High Mobility Group Box 1 Pseudogene 4) is a Pseudogene.

Additional gene information for HMGB1P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P4 Gene

Genomics for HMGB1P4 Gene

Regulatory Elements for HMGB1P4 Gene

Enhancers for HMGB1P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H170529 1.2 Ensembl ENCODE 0.2 +72.0 72040 0 FOXA2 MLX ARID4B FEZF1 DMAP1 YY1 SLC30A9 SP5 MXD4 MIER2 GC02P170510 HMGB1P4
GH02H170525 1 Ensembl ENCODE 0.2 +76.7 76705 1 PKNOX1 ESRRA JUN EBF1 FOSL1 HIC1 ZNF366 SCRT2 FOS RUNX3 GC02P170510 HMGB1P4
GH02H170567 0.5 ENCODE 0.3 +34.4 34446 1 ZNF316 HNF4G HNF4A RAD21 MAFK UBR3 ENSG00000239467 HMGB1P4 GC02P170510
GH02H170509 0.7 ENCODE 0.2 +92.4 92399 0 PKNOX1 CBFB NR2F1 JUNB DPF2 ZBTB40 BATF RELA BCL11A EED GC02P170510 HMGB1P4
GH02H170554 0.5 ENCODE 0.2 +47.6 47600 1 JUND NBN HNF4A RAD21 HMGB1P4 GC02P170510
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGB1P4 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB1P4 Gene

Chromosome:
2
Start:
170,600,138 bp from pter
End:
170,602,384 bp from pter
Size:
2,247 bases
Orientation:
Minus strand

Genomic View for HMGB1P4 Gene

Genes around HMGB1P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P4 Gene

Proteins for HMGB1P4 Gene

Post-translational modifications for HMGB1P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P4 Gene

Domains & Families for HMGB1P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P4 Gene

Function for HMGB1P4 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGB1P4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P4 Gene

Localization for HMGB1P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB1P4 Gene

Pathways & Interactions for HMGB1P4 Gene

SuperPathways for HMGB1P4 Gene

No Data Available

Interacting Proteins for HMGB1P4 Gene

Gene Ontology (GO) - Biological Process for HMGB1P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB1P4 Gene

Drugs & Compounds for HMGB1P4 Gene

No Compound Related Data Available

Transcripts for HMGB1P4 Gene

mRNA/cDNA for HMGB1P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGB1P4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P4 Gene

No ASD Table

Relevant External Links for HMGB1P4 Gene

GeneLoc Exon Structure for
HMGB1P4
ECgene alternative splicing isoforms for
HMGB1P4

Expression for HMGB1P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB1P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P4 Gene:

HMGB1P4
genes like me logo Genes that share expression patterns with HMGB1P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB1P4 Gene

Orthologs for HMGB1P4 Gene

Evolution for HMGB1P4 Gene

ENSEMBL:
Gene Tree for HMGB1P4 (if available)
TreeFam:
Gene Tree for HMGB1P4 (if available)

No data available for Orthologs for HMGB1P4 Gene

Paralogs for HMGB1P4 Gene

No data available for Paralogs for HMGB1P4 Gene

Variants for HMGB1P4 Gene

Relevant External Links for HMGB1P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB1P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P4 Gene

Disorders for HMGB1P4 Gene

No disorders were found for HMGB1P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P4 Gene

Publications for HMGB1P4 Gene

  1. Mapping and molecular characterization of five HMG1-related DNA sequences. (PMID: 9925949) Rogalla P … Bullerdiek J (Cytogenetics and cell genetics 1998) 2 3 60
  2. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 60

Products for HMGB1P4 Gene

Sources for HMGB1P4 Gene

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