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Aliases for HMGB1P28 Gene

Aliases for HMGB1P28 Gene

  • High Mobility Group Box 1 Pseudogene 28 2 3 5
  • High-Mobility Group Box 1 Pseudogene 28 2

External Ids for HMGB1P28 Gene

Previous GeneCards Identifiers for HMGB1P28 Gene

  • GC04U901401

Summaries for HMGB1P28 Gene

GeneCards Summary for HMGB1P28 Gene

HMGB1P28 (High Mobility Group Box 1 Pseudogene 28) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P28 Gene

Genomics for HMGB1P28 Gene

Regulatory Elements for HMGB1P28 Gene

Enhancers for HMGB1P28 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F041857 1.3 FANTOM5 0.4 -13.4 -13381 0.4 ATF3 RAD21 UCHL1 UCHL1-AS1 PHOX2B HMGB1P28 LINC00682
GH04F041873 0.3 FANTOM5 0.3 -30.0 -30029 0.4 SMARCA4 RNF2 POLR2A CBX2 CTBP2 REST EZH2 PHOX2B LOC105374421 LIMCH1 LOC105374425 LOC105374424 LINC00682 HMGB1P28
GH04F041878 0.5 FANTOM5 0.3 -35.0 -34992 0.3 SUZ12 RNF2 CBX2 CTBP2 REST EZH2 PHOX2B LINC00682 HMGB1P28
GH04F041795 0.4 ENCODE 0.2 +47.4 47436 1.4 SMARCA4 POLR2A TEAD4 RNU1-49P GC04M041771 HMGB1P28
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGB1P28 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB1P28 Gene

41,841,615 bp from pter
41,844,052 bp from pter
2,438 bases
Minus strand

Genomic View for HMGB1P28 Gene

Genes around HMGB1P28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P28 Gene

Proteins for HMGB1P28 Gene

Post-translational modifications for HMGB1P28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P28 Gene

Domains & Families for HMGB1P28 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P28 Gene

Function for HMGB1P28 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P28 Gene

Localization for HMGB1P28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB1P28 Gene

Pathways & Interactions for HMGB1P28 Gene

SuperPathways for HMGB1P28 Gene

No Data Available

Interacting Proteins for HMGB1P28 Gene

Gene Ontology (GO) - Biological Process for HMGB1P28 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGB1P28 Gene

Transcripts for HMGB1P28 Gene

mRNA/cDNA for HMGB1P28 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P28 Gene

No ASD Table

Relevant External Links for HMGB1P28 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGB1P28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGB1P28 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P28 Gene:

genes like me logo Genes that share expression patterns with HMGB1P28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGB1P28 Gene

Orthologs for HMGB1P28 Gene

Evolution for HMGB1P28 Gene

Gene Tree for HMGB1P28 (if available)
Gene Tree for HMGB1P28 (if available)

No data available for Orthologs for HMGB1P28 Gene

Paralogs for HMGB1P28 Gene

No data available for Paralogs for HMGB1P28 Gene

Variants for HMGB1P28 Gene

Relevant External Links for HMGB1P28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P28 Gene

Disorders for HMGB1P28 Gene

No disorders were found for HMGB1P28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P28 Gene

Publications for HMGB1P28 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
  2. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3 64

Products for HMGB1P28 Gene

Sources for HMGB1P28 Gene

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