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Aliases for HMGB1P27 Gene

Subcategory (RNA class) for HMGB1P27 Gene


Aliases for HMGB1P27 Gene

  • High Mobility Group Box 1 Pseudogene 27 2 3 5
  • High-Mobility Group Box 1 Pseudogene 27 2

External Ids for HMGB1P27 Gene

ORGUL Members for HMGB1P27 Gene

Previous GeneCards Identifiers for HMGB1P27 Gene

  • GC02U902272
  • GC02P192039

Summaries for HMGB1P27 Gene

GeneCards Summary for HMGB1P27 Gene

HMGB1P27 (High Mobility Group Box 1 Pseudogene 27) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HMGB1P27 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P27 Gene

Genomics for HMGB1P27 Gene

GeneHancer (GH) Regulatory Elements for HMGB1P27 Gene

Promoters and enhancers for HMGB1P27 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I191165 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -4.6 -4575 9.2 PKNOX1 FOXA2 NFIB ARID4B SIN3A ZNF2 RAD21 RFX5 YY1 ZNF335 MYO1B RNU6-959P ENSG00000227542 STAT4 HMGB1P27 ENSG00000280083
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGB1P27 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGB1P27 Gene

Genomic Locations for HMGB1P27 Gene
603 bases
Plus strand

Genomic View for HMGB1P27 Gene

Genes around HMGB1P27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P27 Gene

Proteins for HMGB1P27 Gene

Post-translational modifications for HMGB1P27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P27 Gene

Domains & Families for HMGB1P27 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P27 Gene

Function for HMGB1P27 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P27 Gene

Localization for HMGB1P27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB1P27 Gene

Pathways & Interactions for HMGB1P27 Gene

SuperPathways for HMGB1P27 Gene

No Data Available

Interacting Proteins for HMGB1P27 Gene

Gene Ontology (GO) - Biological Process for HMGB1P27 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGB1P27 Gene

Drugs & Compounds for HMGB1P27 Gene

No Compound Related Data Available

Transcripts for HMGB1P27 Gene

mRNA/cDNA for HMGB1P27 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P27 Gene

No ASD Table

Relevant External Links for HMGB1P27 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGB1P27 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB1P27 Gene

mRNA differential expression in normal tissues according to GTEx for HMGB1P27 Gene

This gene is overexpressed in Liver (x11.6).

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P27 Gene:

genes like me logo Genes that share expression patterns with HMGB1P27: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB1P27 Gene

Orthologs for HMGB1P27 Gene

Evolution for HMGB1P27 Gene

Gene Tree for HMGB1P27 (if available)
Gene Tree for HMGB1P27 (if available)

No data available for Orthologs for HMGB1P27 Gene

Paralogs for HMGB1P27 Gene

No data available for Paralogs for HMGB1P27 Gene

Variants for HMGB1P27 Gene

Additional Variant Information for HMGB1P27 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P27 Gene

Disorders for HMGB1P27 Gene

No disorders were found for HMGB1P27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P27 Gene

Publications for HMGB1P27 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58

Products for HMGB1P27 Gene

Sources for HMGB1P27 Gene

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