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Aliases for HMGB1P26 Gene

Aliases for HMGB1P26 Gene

  • High Mobility Group Box 1 Pseudogene 26 2 3 5
  • High-Mobility Group Box 1 Pseudogene 26 2

External Ids for HMGB1P26 Gene

Previous GeneCards Identifiers for HMGB1P26 Gene

  • GC01M229841

Summaries for HMGB1P26 Gene

GeneCards Summary for HMGB1P26 Gene

HMGB1P26 (High Mobility Group Box 1 Pseudogene 26) is a Pseudogene.

Additional gene information for HMGB1P26 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P26 Gene

Genomics for HMGB1P26 Gene

Regulatory Elements for HMGB1P26 Gene

Enhancers for HMGB1P26 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H229219 2 FANTOM5 Ensembl ENCODE dbSUPER 14.6 +483.9 483917 4 HDGF PKNOX1 FOXA2 ARNT ARID4B YBX1 FEZF1 DMAP1 ZNF2 YY1 NUP133 ENSG00000269890 URB2 HMGN2P19 HIST3H3 LOC105373158 TAF5L ENSG00000233920 ENSG00000226920 LOC100421842
GH01H228781 1.9 FANTOM5 Ensembl ENCODE dbSUPER 14.6 +922.8 922801 3 FEZF1 ZNF2 ZNF302 ZNF416 FOS REST KAT8 MIER3 ZNF610 ZSCAN16 NUP133 CICP26 C1orf35 ENSG00000269890 HMGN2P19 HIST3H3 TAF5L ABCB10 PRSS38 URB2
GH01H229224 1.2 ENCODE dbSUPER 14.6 +480.5 480481 1 YBX1 FEZF1 GLI4 BRCA1 ZNF2 ZNF121 FOS SP5 REST PPARG NUP133 ENSG00000233920 LOC100421842 HMGB1P26 LINC01682 LOC105373158 ENSG00000269890 HIST3H3
GH01H229692 1.1 Ensembl ENCODE dbSUPER 0.4 +11.8 11799 2 ZNF132 ZIC2 POLR2A SCRT2 GLIS1 FOS RCOR1 ZNF600 ZNF423 LOC100131918 HMGB1P26
GH01H229715 0.8 ENCODE 0.4 -9.2 -9246 0 CTCF ESRRA ETV1 MAX BMI1 RAD21 RFX5 CTBP1 ARID3A NCOR1 GC01P229716 HMGB1P26
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HMGB1P26 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB1P26 Gene

Chromosome:
1
Start:
229,705,211 bp from pter
End:
229,705,863 bp from pter
Size:
653 bases
Orientation:
Minus strand

Genomic View for HMGB1P26 Gene

Genes around HMGB1P26 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P26 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P26 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P26 Gene

Proteins for HMGB1P26 Gene

Post-translational modifications for HMGB1P26 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P26 Gene

Domains & Families for HMGB1P26 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P26 Gene

Function for HMGB1P26 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGB1P26
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P26 Gene

Localization for HMGB1P26 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGB1P26 Gene

Pathways & Interactions for HMGB1P26 Gene

SuperPathways for HMGB1P26 Gene

No Data Available

Interacting Proteins for HMGB1P26 Gene

Gene Ontology (GO) - Biological Process for HMGB1P26 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB1P26 Gene

Drugs & Compounds for HMGB1P26 Gene

No Compound Related Data Available

Transcripts for HMGB1P26 Gene

mRNA/cDNA for HMGB1P26 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HMGB1P26
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P26 Gene

No ASD Table

Relevant External Links for HMGB1P26 Gene

GeneLoc Exon Structure for
HMGB1P26
ECgene alternative splicing isoforms for
HMGB1P26

Expression for HMGB1P26 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB1P26 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P26 Gene:

HMGB1P26
genes like me logo Genes that share expression patterns with HMGB1P26: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB1P26 Gene

Orthologs for HMGB1P26 Gene

Evolution for HMGB1P26 Gene

ENSEMBL:
Gene Tree for HMGB1P26 (if available)
TreeFam:
Gene Tree for HMGB1P26 (if available)

No data available for Orthologs for HMGB1P26 Gene

Paralogs for HMGB1P26 Gene

No data available for Paralogs for HMGB1P26 Gene

Variants for HMGB1P26 Gene

Relevant External Links for HMGB1P26 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB1P26

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P26 Gene

Disorders for HMGB1P26 Gene

No disorders were found for HMGB1P26 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P26 Gene

Publications for HMGB1P26 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 60

Products for HMGB1P26 Gene

Sources for HMGB1P26 Gene

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