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Aliases for HMGB1P24 Gene

Aliases for HMGB1P24 Gene

  • High Mobility Group Box 1 Pseudogene 24 2 3 5
  • High-Mobility Group Box 1 Pseudogene 24 2

External Ids for HMGB1P24 Gene

Previous GeneCards Identifiers for HMGB1P24 Gene

  • GC00U931262
  • GC17M035503

Summaries for HMGB1P24 Gene

GeneCards Summary for HMGB1P24 Gene

HMGB1P24 (High Mobility Group Box 1 Pseudogene 24) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P24 Gene

Genomics for HMGB1P24 Gene

Regulatory Elements for HMGB1P24 Gene

Enhancers for HMGB1P24 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F037716 1.2 Ensembl ENCODE 4.3 -572.9 -572947 2.6 ZFP64 ARID4B SIN3A FEZF1 ZNF48 YY1 MXD4 PPARG KAT8 GLIS1 HNF1B HMGB1P24 LOC105371754
GH17F037707 1.6 FANTOM5 Ensembl ENCODE 4.2 -566.5 -566460 7.3 HDGF ATF1 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 ZNF143 ZNF263 HNF1B MRPL45 HMGB1P24 ACACA LOC105371754
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGB1P24 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB1P24 Gene

Chromosome:
17
Start:
37,143,607 bp from pter
End:
37,144,463 bp from pter
Size:
857 bases
Orientation:
Minus strand

Genomic View for HMGB1P24 Gene

Genes around HMGB1P24 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P24 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P24 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P24 Gene

Proteins for HMGB1P24 Gene

Post-translational modifications for HMGB1P24 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P24 Gene

Domains & Families for HMGB1P24 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P24 Gene

Function for HMGB1P24 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P24 Gene

Localization for HMGB1P24 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB1P24 Gene

Pathways & Interactions for HMGB1P24 Gene

SuperPathways for HMGB1P24 Gene

No Data Available

Interacting Proteins for HMGB1P24 Gene

Gene Ontology (GO) - Biological Process for HMGB1P24 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB1P24 Gene

Transcripts for HMGB1P24 Gene

mRNA/cDNA for HMGB1P24 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P24 Gene

No ASD Table

Relevant External Links for HMGB1P24 Gene

GeneLoc Exon Structure for
HMGB1P24
ECgene alternative splicing isoforms for
HMGB1P24

Expression for HMGB1P24 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGB1P24 Gene

mRNA differential expression in normal tissues according to GTEx for HMGB1P24 Gene

This gene is overexpressed in Prostate (x5.3).

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P24 Gene:

HMGB1P24
genes like me logo Genes that share expression patterns with HMGB1P24: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGB1P24 Gene

Orthologs for HMGB1P24 Gene

Evolution for HMGB1P24 Gene

ENSEMBL:
Gene Tree for HMGB1P24 (if available)
TreeFam:
Gene Tree for HMGB1P24 (if available)

No data available for Orthologs for HMGB1P24 Gene

Paralogs for HMGB1P24 Gene

No data available for Paralogs for HMGB1P24 Gene

Variants for HMGB1P24 Gene

Relevant External Links for HMGB1P24 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB1P24

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P24 Gene

Disorders for HMGB1P24 Gene

No disorders were found for HMGB1P24 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P24 Gene

Publications for HMGB1P24 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64

Products for HMGB1P24 Gene

Sources for HMGB1P24 Gene

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