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HMGB1P18 Gene(Pseudogene)

High Mobility Group Box 1 Pseudogene 18

GCID:
GC01P080283
GIFtS:
12
Genes Participants
UDN Logo

Aliases for HMGB1P18 Gene

Subcategory (RNA class) for HMGB1P18 Gene

lncRNA

Aliases for HMGB1P18 Gene

  • High Mobility Group Box 1 Pseudogene 18 2 3 5
  • High-Mobility Group Box 1 Pseudogene 18 2

External Ids for HMGB1P18 Gene

ORGUL Members for HMGB1P18 Gene

Previous GeneCards Identifiers for HMGB1P18 Gene

  • GC01P080751

Summaries for HMGB1P18 Gene

GeneCards Summary for HMGB1P18 Gene

HMGB1P18 (High Mobility Group Box 1 Pseudogene 18) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P18 Gene

Genomics for HMGB1P18 Gene

Products:

  1. Regulatory Element

Genomic Location for HMGB1P18 Gene

Chromosome:
1
Start:
80,283,352 bp from pter
End:
80,283,970 bp from pter
Size:
619 bases
Orientation:
Plus strand

Genomic View for HMGB1P18 Gene

Genes around HMGB1P18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P18 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HMGB1P18 Gene

No data available for Regulatory Elements for HMGB1P18 Gene

Proteins for HMGB1P18 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HMGB1P18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P18 Gene

Domains & Families for HMGB1P18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P18 Gene

Function for HMGB1P18 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P18 Gene

Localization for HMGB1P18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB1P18 Gene

Pathways & Interactions for HMGB1P18 Gene

SuperPathways for HMGB1P18 Gene

PathCards logo More details on SuperPathways for HMGB1P18
No Data Available

Interacting Proteins for HMGB1P18 Gene

Gene Ontology (GO) - Biological Process for HMGB1P18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB1P18 Gene

Drugs & Compounds for HMGB1P18 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HMGB1P18 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HMGB1P18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P18 Gene

No ASD Table

Relevant External Links for HMGB1P18 Gene

GeneLoc Exon Structure for
HMGB1P18
ECgene alternative splicing isoforms for
HMGB1P18

Expression for HMGB1P18 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGB1P18 Gene

mRNA expression in normal human tissues for HMGB1P18 Gene
mRNA expression by GTEx for HMGB1P18 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P18 Gene:

HMGB1P18
genes like me logo Genes that share expression patterns with HMGB1P18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGB1P18 Gene

Orthologs for HMGB1P18 Gene

Evolution for HMGB1P18 Gene

ENSEMBL:
Gene Tree for HMGB1P18 (if available)
TreeFam:
Gene Tree for HMGB1P18 (if available)

No data available for Orthologs for HMGB1P18 Gene

Paralogs for HMGB1P18 Gene

No data available for Paralogs for HMGB1P18 Gene

Variants for HMGB1P18 Gene

Relevant External Links for HMGB1P18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB1P18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P18 Gene

Disorders for HMGB1P18 Gene

No disorders were found for HMGB1P18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGB1P18 Gene

Publications for HMGB1P18 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3 64

Products for HMGB1P18 Gene

Sources for HMGB1P18 Gene

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