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Aliases for HMGB1P10 Gene

Aliases for HMGB1P10 Gene

  • High Mobility Group Box 1 Pseudogene 10 2 3 5
  • High-Mobility Group (Nonhistone Chromosomal) Protein 1-Like 10 2 3
  • High-Mobility Group Box 1-Like 10 2 3
  • High-Mobility Group Box 1 Pseudogene 10 2
  • BK445C9.3 3
  • HMGB1L10 3
  • HMG1L10 3

External Ids for HMGB1P10 Gene

Previous HGNC Symbols for HMGB1P10 Gene

  • HMG1L10
  • HMGB1L10

Previous GeneCards Identifiers for HMGB1P10 Gene

  • GC22P026957

Summaries for HMGB1P10 Gene

GeneCards Summary for HMGB1P10 Gene

HMGB1P10 (High Mobility Group Box 1 Pseudogene 10) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGB1P10 Gene

Genomics for HMGB1P10 Gene

Regulatory Elements for HMGB1P10 Gene

Enhancers for HMGB1P10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22F026560 0.5 Ensembl ENCODE 30.7 0.0 -28 0.8 ZNF366 HMGB1P10 TFIP11 MIR548J
GH22F026562 0.6 ENCODE 25.6 +2.3 2343 1.1 CTCF ZMYM3 SMC3 RAD21 ZKSCAN1 YY1 HMGB1P10 TFIP11 TPST2
GH22F026558 0.5 Ensembl 24.7 -1.8 -1828 0.4 CTCF ATF3 ZIC2 HMGB1P10 TFIP11 MIR548J
GH22F026549 1.3 Ensembl ENCODE 20.6 -7.5 -7511 6.1 BCOR SAP130 ZMYM3 ZNF384 ZIC2 YY1 ZNF121 ZFHX2 MAFK EGR2 HMGB1P10 TPST2 MIR548J GC22M026522
GH22F026631 1 FANTOM5 ENCODE 19.9 +72.2 72212 3.0 ATF1 ARNT ELK1 GATA2 NCOA1 REST CREB3 MBD2 MEF2D SMARCA4 TPST2 HMGB1P10 CRYBA4 MIR548J TFIP11 HPS4 SRRD MIATNB CRYBB1 ISCA2P1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGB1P10 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGB1P10 Gene

Chromosome:
22
Start:
26,560,428 bp from pter
End:
26,561,616 bp from pter
Size:
1,189 bases
Orientation:
Plus strand

Genomic View for HMGB1P10 Gene

Genes around HMGB1P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGB1P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGB1P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGB1P10 Gene

Proteins for HMGB1P10 Gene

Post-translational modifications for HMGB1P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGB1P10 Gene

Domains & Families for HMGB1P10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGB1P10 Gene

Function for HMGB1P10 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGB1P10 Gene

Localization for HMGB1P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGB1P10 Gene

Pathways & Interactions for HMGB1P10 Gene

SuperPathways for HMGB1P10 Gene

No Data Available

Interacting Proteins for HMGB1P10 Gene

Gene Ontology (GO) - Biological Process for HMGB1P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGB1P10 Gene

Transcripts for HMGB1P10 Gene

mRNA/cDNA for HMGB1P10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGB1P10 Gene

No ASD Table

Relevant External Links for HMGB1P10 Gene

GeneLoc Exon Structure for
HMGB1P10
ECgene alternative splicing isoforms for
HMGB1P10

Expression for HMGB1P10 Gene

mRNA expression in normal human tissues for HMGB1P10 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGB1P10 Gene:

HMGB1P10
genes like me logo Genes that share expression patterns with HMGB1P10: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGB1P10 Gene

Orthologs for HMGB1P10 Gene

Evolution for HMGB1P10 Gene

ENSEMBL:
Gene Tree for HMGB1P10 (if available)
TreeFam:
Gene Tree for HMGB1P10 (if available)

No data available for Orthologs for HMGB1P10 Gene

Paralogs for HMGB1P10 Gene

No data available for Paralogs for HMGB1P10 Gene

Variants for HMGB1P10 Gene

Relevant External Links for HMGB1P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGB1P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGB1P10 Gene

Disorders for HMGB1P10 Gene

Relevant External Links for HMGB1P10

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HMGB1P10

No disorders were found for HMGB1P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HMGB1P10 Gene

Publications for HMGB1P10 Gene

  1. The DNA sequence of human chromosome 22. (PMID: 10591208) Dunham I. … Wright H. (Nature 1999) 2 3 64
  2. Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover. (PMID: 24999758) Elzi D.J. … Shiio Y. (J. Proteome Res. 2014) 3 64
  3. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. (PMID: 21145461) Bennett E.J. … Harper J.W. (Cell 2010) 3 64
  4. Complementary quantitative proteomics reveals that transcription factor AP-4 mediates E-box-dependent complex formation for transcriptional repression of HDM2. (PMID: 19505873) Ku W.C. … Chen Y.J. (Mol. Cell Proteomics 2009) 3 64
  5. Toward a confocal subcellular atlas of the human proteome. (PMID: 18029348) Barbe L. … Andersson-Svahn H. (Mol. Cell Proteomics 2008) 3 64

Products for HMGB1P10 Gene

Sources for HMGB1P10 Gene

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