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Aliases for HMGA1P8 Gene

Aliases for HMGA1P8 Gene

  • High Mobility Group AT-Hook 1 Pseudogene 8 2 3 5
  • High Mobility Group AT-Hook 1 Pseudogene 8 (Functional) 3
  • HMGA1-P 3

External Ids for HMGA1P8 Gene

Previous GeneCards Identifiers for HMGA1P8 Gene

  • GC00U931285
  • GC02M074649
  • GC02M074654
  • GC02M074663

Summaries for HMGA1P8 Gene

GeneCards Summary for HMGA1P8 Gene

HMGA1P8 (High Mobility Group AT-Hook 1 Pseudogene 8) is a Pseudogene.

Additional gene information for HMGA1P8 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGA1P8 Gene

Genomics for HMGA1P8 Gene

GeneHancer (GH) Regulatory Elements for HMGA1P8 Gene

Promoters and enhancers for HMGA1P8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I074417 Promoter 0.5 EPDnew 550.8 +1.1 1050 0.1 C2orf81 PIR49274 HMGA1P8 ENSG00000159239
GH02I074421 Enhancer 0.4 Ensembl 550.8 -1.2 -1210 0.2 HDGF ATF2 C2orf81 GC02M074419 PIR40772 WDR54 HMGA1P8 ENSG00000159239
GH02I074419 Enhancer 0.2 Ensembl 550.8 -0.6 -610 0.2 HMGA1P8 C2orf81 PIR40772 GC02M074419 ENSG00000159239
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HMGA1P8 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HMGA1P8 Gene

Genomic Locations for HMGA1P8 Gene
chr2:74,416,811-74,418,691
(GRCh38/hg38)
Size:
1,881 bases
Orientation:
Minus strand
chr2:74,645,222-74,645,569
(GRCh37/hg19)

Genomic View for HMGA1P8 Gene

Genes around HMGA1P8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGA1P8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGA1P8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGA1P8 Gene

Proteins for HMGA1P8 Gene

Post-translational modifications for HMGA1P8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGA1P8 Gene

Domains & Families for HMGA1P8 Gene

Gene Families for HMGA1P8 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HMGA1P8: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGA1P8 Gene

Function for HMGA1P8 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGA1P8 Gene

Localization for HMGA1P8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HMGA1P8 Gene

Pathways & Interactions for HMGA1P8 Gene

SuperPathways for HMGA1P8 Gene

No Data Available

Interacting Proteins for HMGA1P8 Gene

Gene Ontology (GO) - Biological Process for HMGA1P8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGA1P8 Gene

Drugs & Compounds for HMGA1P8 Gene

No Compound Related Data Available

Transcripts for HMGA1P8 Gene

mRNA/cDNA for HMGA1P8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGA1P8 Gene

No ASD Table

Relevant External Links for HMGA1P8 Gene

GeneLoc Exon Structure for
HMGA1P8
ECgene alternative splicing isoforms for
HMGA1P8

Expression for HMGA1P8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGA1P8 Gene

mRNA differential expression in normal tissues according to GTEx for HMGA1P8 Gene

This gene is overexpressed in Testis (x6.5) and Pituitary (x5.9).

NURSA nuclear receptor signaling pathways regulating expression of HMGA1P8 Gene:

HMGA1P8
genes like me logo Genes that share expression patterns with HMGA1P8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGA1P8 Gene

Orthologs for HMGA1P8 Gene

Evolution for HMGA1P8 Gene

ENSEMBL:
Gene Tree for HMGA1P8 (if available)
TreeFam:
Gene Tree for HMGA1P8 (if available)

No data available for Orthologs for HMGA1P8 Gene

Paralogs for HMGA1P8 Gene

No data available for Paralogs for HMGA1P8 Gene

Variants for HMGA1P8 Gene

Additional Variant Information for HMGA1P8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGA1P8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGA1P8 Gene

Disorders for HMGA1P8 Gene

No disorders were found for HMGA1P8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGA1P8 Gene

Publications for HMGA1P8 Gene

  1. Pseudogene-mediated posttranscriptional silencing of HMGA1 can result in insulin resistance and type 2 diabetes. (PMID: 20975707) Chiefari E … Brunetti A (Nature communications 2010) 2 3 58
  2. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu LZ … Landsman D (Genome research 2003) 2 3 58
  3. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 58

Products for HMGA1P8 Gene

Sources for HMGA1P8 Gene

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