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HMGA1P6 Gene(Pseudogene)

High Mobility Group AT-Hook 1 Pseudogene 6

GCID:
GC13P023134
GIFtS:
12
Genes Participants
UDN Logo

Aliases for HMGA1P6 Gene

Aliases for HMGA1P6 Gene

  • High Mobility Group AT-Hook 1 Pseudogene 6 2 3 5
  • High Mobility Group AT-Hook 1-Like 6 2 3
  • High Mobility Group Protein Gene A1-Like 6 3
  • HMGA1L6 3

External Ids for HMGA1P6 Gene

Previous HGNC Symbols for HMGA1P6 Gene

  • HMGA1L6

Previous GeneCards Identifiers for HMGA1P6 Gene

  • GC13P023711

Summaries for HMGA1P6 Gene

GeneCards Summary for HMGA1P6 Gene

HMGA1P6 (High Mobility Group AT-Hook 1 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGA1P6 Gene

Genomics for HMGA1P6 Gene

Products:

  1. Regulatory Element

Genomic Location for HMGA1P6 Gene

Chromosome:
13
Start:
23,134,168 bp from pter
End:
23,135,915 bp from pter
Size:
1,748 bases
Orientation:
Plus strand

Genomic View for HMGA1P6 Gene

Genes around HMGA1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGA1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGA1P6 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HMGA1P6 Gene

No data available for Regulatory Elements for HMGA1P6 Gene

Proteins for HMGA1P6 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HMGA1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGA1P6 Gene

Domains & Families for HMGA1P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGA1P6 Gene

Function for HMGA1P6 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGA1P6 Gene

Localization for HMGA1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGA1P6 Gene

Pathways & Interactions for HMGA1P6 Gene

SuperPathways for HMGA1P6 Gene

PathCards logo More details on SuperPathways for HMGA1P6
No Data Available

Interacting Proteins for HMGA1P6 Gene

Gene Ontology (GO) - Biological Process for HMGA1P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HMGA1P6 Gene

Drugs & Compounds for HMGA1P6 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HMGA1P6 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HMGA1P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HMGA1P6 Gene

No ASD Table

Relevant External Links for HMGA1P6 Gene

GeneLoc Exon Structure for
HMGA1P6
ECgene alternative splicing isoforms for
HMGA1P6

Expression for HMGA1P6 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HMGA1P6 Gene

mRNA expression in normal human tissues for HMGA1P6 Gene
mRNA expression by GTEx for HMGA1P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGA1P6 Gene:

HMGA1P6
genes like me logo Genes that share expression patterns with HMGA1P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HMGA1P6 Gene

Orthologs for HMGA1P6 Gene

Evolution for HMGA1P6 Gene

ENSEMBL:
Gene Tree for HMGA1P6 (if available)
TreeFam:
Gene Tree for HMGA1P6 (if available)

No data available for Orthologs for HMGA1P6 Gene

Paralogs for HMGA1P6 Gene

No data available for Paralogs for HMGA1P6 Gene

Variants for HMGA1P6 Gene

Relevant External Links for HMGA1P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HMGA1P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGA1P6 Gene

Disorders for HMGA1P6 Gene

Relevant External Links for HMGA1P6

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HMGA1P6

No disorders were found for HMGA1P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HMGA1P6 Gene

Publications for HMGA1P6 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
  2. MGA1-pseudogene expression is induced in human pituitary tumors. (PMID: 25894544) Esposito F. … Fusco A. (Cell Cycle 2015) 3 64
  3. HMGA1 pseudogenes as candidate proto-oncogenic competitive endogenous RNAs. (PMID: 25268743) Esposito F. … Fusco A. (Oncotarget 2014) 3 64

Products for HMGA1P6 Gene

Sources for HMGA1P6 Gene

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