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Aliases for HMGA1P3 Gene

Aliases for HMGA1P3 Gene

  • High Mobility Group AT-Hook 1 Pseudogene 3 2 3 5
  • High Mobility Group AT-Hook 1-Like 3 2 3
  • HMGA1L3 Retropseudogene 3
  • HMGIYL3 3
  • HMGA1L3 3

External Ids for HMGA1P3 Gene

Previous HGNC Symbols for HMGA1P3 Gene

  • HMGA1L3

Previous GeneCards Identifiers for HMGA1P3 Gene

  • GC12M110867

Summaries for HMGA1P3 Gene

GeneCards Summary for HMGA1P3 Gene

HMGA1P3 (High Mobility Group AT-Hook 1 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HMGA1P3 Gene

Genomics for HMGA1P3 Gene

Regulatory Elements for HMGA1P3 Gene

Enhancers for HMGA1P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F110429 1.2 FANTOM5 Ensembl 0.8 +0.8 828 0.5 ZFHX2 EGR2 HMGA1P3 GC12M110397
GH12F110430 1.2 Ensembl ENCODE 0.8 -1.3 -1268 1.4 HDGF ATF1 ARID4B SIN3A ZNF2 YY1 ZNF143 ZNF207 KLF13 SP3 FAM216A HMGA1P3 PIR42495
GH12F110424 0.6 ENCODE 0.4 +6.0 5973 0.1 CTCF L3MBTL2 TEAD4 HMGA1P3 GC12M110397
GH12F110416 0.2 Ensembl 0.4 +12.9 12893 1.4 ZNF384 ZBTB8A ATF2 CHAMP1 POLR2H ADNP HMBOX1 ZNF24 ARPC3 GC12M110397 HMGA1P3
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HMGA1P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for HMGA1P3 Gene

110,428,598 bp from pter
110,430,393 bp from pter
1,796 bases
Minus strand

Genomic View for HMGA1P3 Gene

Genes around HMGA1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HMGA1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HMGA1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HMGA1P3 Gene

Proteins for HMGA1P3 Gene

Post-translational modifications for HMGA1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HMGA1P3 Gene

Domains & Families for HMGA1P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HMGA1P3 Gene

Function for HMGA1P3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HMGA1P3 Gene

Localization for HMGA1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HMGA1P3 Gene

Pathways & Interactions for HMGA1P3 Gene

SuperPathways for HMGA1P3 Gene

No Data Available

Interacting Proteins for HMGA1P3 Gene

Gene Ontology (GO) - Biological Process for HMGA1P3 Gene


No data available for Pathways by source and SIGNOR curated interactions for HMGA1P3 Gene

Transcripts for HMGA1P3 Gene

mRNA/cDNA for HMGA1P3 Gene

(16) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HMGA1P3 Gene

No ASD Table

Relevant External Links for HMGA1P3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HMGA1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HMGA1P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of HMGA1P3 Gene:

genes like me logo Genes that share expression patterns with HMGA1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HMGA1P3 Gene

Orthologs for HMGA1P3 Gene

Evolution for HMGA1P3 Gene

Gene Tree for HMGA1P3 (if available)
Gene Tree for HMGA1P3 (if available)

No data available for Orthologs for HMGA1P3 Gene

Paralogs for HMGA1P3 Gene

No data available for Paralogs for HMGA1P3 Gene

Variants for HMGA1P3 Gene

Relevant External Links for HMGA1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HMGA1P3 Gene

Disorders for HMGA1P3 Gene

No disorders were found for HMGA1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HMGA1P3 Gene

Publications for HMGA1P3 Gene

  1. Retroposed copies of the HMG genes: a window to genome dynamics. (PMID: 12727900) Strichman-Almashanu L.Z. … Landsman D. (Genome Res. 2003) 2 3 64
  2. Significant correlation between the breakpoints of rare clonal aberrations in benign solid tumors and the assignment of HMGIY retropseudogenes. (PMID: 11672774) Rogalla P. … Bullerdiek J. (Cancer Genet. Cytogenet. 2001) 2 3 64

Products for HMGA1P3 Gene

Sources for HMGA1P3 Gene

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