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Aliases for HM13-AS1 Gene

Subcategory (RNA class) for HM13-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for HM13-AS1 Gene

  • HM13 Antisense RNA 1 2 3 5
  • HM13 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for HM13-AS1 Gene

Previous GeneCards Identifiers for HM13-AS1 Gene

  • GC00U932991
  • GC20M030156

Summaries for HM13-AS1 Gene

GeneCards Summary for HM13-AS1 Gene

HM13-AS1 (HM13 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HM13-AS1 Gene

Genomics for HM13-AS1 Gene

Regulatory Elements for HM13-AS1 Gene

Promoters for HM13-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around HM13-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HM13-AS1 Gene

Chromosome:
20
Start:
31,567,707 bp from pter
End:
31,573,263 bp from pter
Size:
5,557 bases
Orientation:
Minus strand

Genomic View for HM13-AS1 Gene

Genes around HM13-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HM13-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HM13-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HM13-AS1 Gene

Proteins for HM13-AS1 Gene

Post-translational modifications for HM13-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HM13-AS1 Gene

Domains & Families for HM13-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HM13-AS1 Gene

Function for HM13-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HM13-AS1 Gene

Localization for HM13-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HM13-AS1 Gene

Pathways & Interactions for HM13-AS1 Gene

SuperPathways for HM13-AS1 Gene

No Data Available

Interacting Proteins for HM13-AS1 Gene

Gene Ontology (GO) - Biological Process for HM13-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HM13-AS1 Gene

Drugs & Compounds for HM13-AS1 Gene

No Compound Related Data Available

Transcripts for HM13-AS1 Gene

mRNA/cDNA for HM13-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HM13-AS1 Gene

No ASD Table

Relevant External Links for HM13-AS1 Gene

GeneLoc Exon Structure for
HM13-AS1
ECgene alternative splicing isoforms for
HM13-AS1

Expression for HM13-AS1 Gene

mRNA expression in normal human tissues for HM13-AS1 Gene

SOURCE GeneReport for Unigene cluster for HM13-AS1 Gene Hs.743198

genes like me logo Genes that share expression patterns with HM13-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HM13-AS1 Gene

Orthologs for HM13-AS1 Gene

Evolution for HM13-AS1 Gene

ENSEMBL:
Gene Tree for HM13-AS1 (if available)
TreeFam:
Gene Tree for HM13-AS1 (if available)

No data available for Orthologs for HM13-AS1 Gene

Paralogs for HM13-AS1 Gene

No data available for Paralogs for HM13-AS1 Gene

Variants for HM13-AS1 Gene

Sequence variations from dbSNP and Humsavar for HM13-AS1 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs387622 -- 31,572,212(+) ttgag(A/G)aagag intron-variant
rs1471782 -- 31,573,320(-) ccggg(C/T)ccgcc upstream-variant-2KB
rs6120731 -- 31,571,501(+) aaccc(A/G)tcatg intron-variant
rs11470637 -- 31,570,776(+) CACTC(-/CA)GCCAA intron-variant
rs58436170 -- 31,571,589(+) ATAAA(-/CA)GTCAA intron-variant

Relevant External Links for HM13-AS1 Gene

HapMap Linkage Disequilibrium report
HM13-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HM13-AS1 Gene

Disorders for HM13-AS1 Gene

Relevant External Links for HM13-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HM13-AS1

No disorders were found for HM13-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HM13-AS1 Gene

Publications for HM13-AS1 Gene

No publications were found for HM13-AS1 Gene.

Products for HM13-AS1 Gene

Sources for HM13-AS1 Gene

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