Free for academic non-profit institutions. Other users need a Commercial license

HLFP1 Gene(Pseudogene)

Hepatic Leukemia Factor Pseudogene 1

GCID:
GC06P132675
GIFtS:
12
Genes Participants
UDN Logo

Aliases for HLFP1 Gene

Subcategory (RNA class) for HLFP1 Gene

lncRNA

Aliases for HLFP1 Gene

  • Hepatic Leukemia Factor Pseudogene 1 2 3 5

External Ids for HLFP1 Gene

ORGUL Members for HLFP1 Gene

Previous GeneCards Identifiers for HLFP1 Gene

  • GC00U933901
  • GC06P132998

Summaries for HLFP1 Gene

GeneCards Summary for HLFP1 Gene

HLFP1 (Hepatic Leukemia Factor Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLFP1 Gene

Genomics for HLFP1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for HLFP1 Gene

Enhancers for HLFP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G132669 1 Ensembl ENCODE 0.7 -2.9 -2946 4.2 CTCF ESRRA FOXA2 ZNF133 MAX RAD21 POLR2A ZNF366 HNF4G SMC3 ENSG00000234484 VNN2 VNN3 RPS12 SNORD100 SNORD101 SNORA33 SLC18B1 VNN1 HLFP1
GH06G132683 0.7 Ensembl ENCODE 0.4 +8.9 8925 1.3 NFE2 NFE2L2 EGR2 ENSG00000234484 VNN3 VNN2 ENSG00000272428 HLFP1 CCNG1P1
GH06G132686 0.6 Ensembl ENCODE 0.4 +12.6 12614 1.3 FOS VNN1 ENSG00000234484 VNN3 VNN2 ENSG00000272428 HLFP1 CCNG1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HLFP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HLFP1 Gene

Chromosome:
6
Start:
132,674,885 bp from pter
End:
132,675,383 bp from pter
Size:
499 bases
Orientation:
Plus strand

Genomic View for HLFP1 Gene

Genes around HLFP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLFP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLFP1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HLFP1 Gene

Proteins for HLFP1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HLFP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLFP1 Gene

Domains & Families for HLFP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLFP1 Gene

Function for HLFP1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLFP1 Gene

Localization for HLFP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HLFP1 Gene

Pathways & Interactions for HLFP1 Gene

SuperPathways for HLFP1 Gene

PathCards logo More details on SuperPathways for HLFP1
No Data Available

Interacting Proteins for HLFP1 Gene

Gene Ontology (GO) - Biological Process for HLFP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLFP1 Gene

Drugs & Compounds for HLFP1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HLFP1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HLFP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HLFP1 Gene

No ASD Table

Relevant External Links for HLFP1 Gene

GeneLoc Exon Structure for
HLFP1
ECgene alternative splicing isoforms for
HLFP1

Expression for HLFP1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HLFP1 Gene

mRNA expression in normal human tissues for HLFP1 Gene
mRNA expression by GTEx for HLFP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of HLFP1 Gene:

HLFP1
genes like me logo Genes that share expression patterns with HLFP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLFP1 Gene

Orthologs for HLFP1 Gene

Evolution for HLFP1 Gene

ENSEMBL:
Gene Tree for HLFP1 (if available)
TreeFam:
Gene Tree for HLFP1 (if available)

No data available for Orthologs for HLFP1 Gene

Paralogs for HLFP1 Gene

No data available for Paralogs for HLFP1 Gene

Variants for HLFP1 Gene

Relevant External Links for HLFP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLFP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLFP1 Gene

Disorders for HLFP1 Gene

Relevant External Links for HLFP1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HLFP1

No disorders were found for HLFP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLFP1 Gene

Publications for HLFP1 Gene

No publications were found for HLFP1 Gene.

Products for HLFP1 Gene

Sources for HLFP1 Gene

Content
Loading form....