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Aliases for HLA-Z Gene

Aliases for HLA-Z Gene

  • Major Histocompatibility Complex, Class I, Z (Pseudogene) 2 3 5
  • HLA-Z1 3

External Ids for HLA-Z Gene

Previous GeneCards Identifiers for HLA-Z Gene

  • GC06U900021
  • GC06P032972
  • GC06P032864
  • GC06P032606

Summaries for HLA-Z Gene

GeneCards Summary for HLA-Z Gene

HLA-Z (Major Histocompatibility Complex, Class I, Z (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-Z Gene

Genomics for HLA-Z Gene

Regulatory Elements for HLA-Z Gene

Enhancers for HLA-Z Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G032893 1.3 Ensembl ENCODE 0.7 -1.5 -1502 3.0 PKNOX1 ZFP64 ARID4B SIN3A DMAP1 ZBTB7B YY1 SLC30A9 ZNF207 ZNF263 PSMB9 HLA-DMA ATF6B BRD2 ITPR3 LEMD2 DAXX RGL2 WDR46 PBX2
GH06G032932 1 ENCODE dbSUPER 0.3 +36.3 36265 0.6 FOXA2 ARNT ZSCAN4 MNT PLRG1 CTBP1 NONO FOXK2 HDAC2 ZNF366 HLA-DMA EGFL8 PPT2 RING1 HLA-DRB5 HLA-DMB HLA-Z
GH06G032933 1 ENCODE dbSUPER 0.3 +37.3 37337 0.2 CTCF ZNF654 RNF2 SMAD5 CBFB ZBED1 TRIM22 REST RAD21 RFX5 HLA-DMB HLA-Z
GH06G032935 0.9 ENCODE dbSUPER 0.3 +40.4 40410 1.9 ZNF362 ZBED1 NFRKB ELF4 FEZF1 ZNF843 ZBTB40 OSR2 ZNF121 PRDM6 HLA-DMA HLA-DRB6 CYP21A1P HLA-DPA1 HLA-DMB HLA-Z
GH06G032920 0.6 Ensembl 0.3 +24.5 24499 0.2 SCRT1 RING1 HNRNPUL1 FOXA2 SCRT2 JUNB SPI1 DXO HCG25 RXRB BRD2 LEMD2 VPS52 HLA-DMB HLA-Z
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HLA-Z on UCSC Golden Path with GeneCards custom track

Genomic Location for HLA-Z Gene

Chromosome:
6
Start:
32,896,402 bp from pter
End:
32,896,490 bp from pter
Size:
89 bases
Orientation:
Plus strand

Genomic View for HLA-Z Gene

Genes around HLA-Z on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-Z Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-Z Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-Z Gene

Post-translational modifications for HLA-Z Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-Z Gene

Domains & Families for HLA-Z Gene

Gene Families for HLA-Z Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-Z: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-Z Gene

Function for HLA-Z Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-Z Gene

Localization for HLA-Z Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HLA-Z Gene

Pathways & Interactions for HLA-Z Gene

SuperPathways for HLA-Z Gene

No Data Available

Interacting Proteins for HLA-Z Gene

Gene Ontology (GO) - Biological Process for HLA-Z Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-Z Gene

Drugs & Compounds for HLA-Z Gene

No Compound Related Data Available

Transcripts for HLA-Z Gene

mRNA/cDNA for HLA-Z Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-Z Gene

No ASD Table

Relevant External Links for HLA-Z Gene

GeneLoc Exon Structure for
HLA-Z
ECgene alternative splicing isoforms for
HLA-Z

Expression for HLA-Z Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-Z Gene

Orthologs for HLA-Z Gene

Evolution for HLA-Z Gene

ENSEMBL:
Gene Tree for HLA-Z (if available)
TreeFam:
Gene Tree for HLA-Z (if available)

No data available for Orthologs for HLA-Z Gene

Paralogs for HLA-Z Gene

No data available for Paralogs for HLA-Z Gene

Variants for HLA-Z Gene

Relevant External Links for HLA-Z Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-Z

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-Z Gene

Disorders for HLA-Z Gene

Relevant External Links for HLA-Z

Genetic Association Database (GAD)
HLA-Z

No disorders were found for HLA-Z Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-Z Gene

Publications for HLA-Z Gene

  1. Evolutionary dynamics of non-coding sequences within the class II region of the human MHC. (PMID: 8568858) Beck S. … Trowsdale J. (J. Mol. Biol. 1996) 2 3 64
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64

Products for HLA-Z Gene

Sources for HLA-Z Gene

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