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Aliases for HLA-Z Gene

Aliases for HLA-Z Gene

  • Major Histocompatibility Complex, Class I, Z (Pseudogene) 2 3 5
  • HLA-Z1 3

External Ids for HLA-Z Gene

Previous GeneCards Identifiers for HLA-Z Gene

  • GC06U900021
  • GC06P032972
  • GC06P032864
  • GC06P032606

Summaries for HLA-Z Gene

GeneCards Summary for HLA-Z Gene

HLA-Z (Major Histocompatibility Complex, Class I, Z (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-Z Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-Z Gene

Genomics for HLA-Z Gene

GeneHancer (GH) Regulatory Elements for HLA-Z Gene

Promoters and enhancers for HLA-Z Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I032893 Enhancer 1.2 Ensembl ENCODE 550.8 -1.5 -1501 3 PKNOX1 ZFP64 ARID4B SIN3A DMAP1 ZBTB7B YY1 SLC30A9 ZNF213 ZNF207 HLA-Z LOC100294145 DAXX BRD2 RGL2 ATF6B LEMD2 SKIV2L WDR46 PBX2
GH06I032932 Enhancer 0.9 ENCODE dbSUPER 0.3 +36.3 36265 0.6 FOXA2 ARNT ZSCAN4 PLRG1 CTBP1 LCORL FOXK2 ZNF366 ZNF282 MNT HLA-DMA PPT2 BRD2 ATF6B LEMD2 WDR46 VPS52 RXRB SKIV2L RGL2
GH06I032933 Enhancer 0.9 ENCODE dbSUPER 0.3 +37.3 37337 0.2 CTCF IRF4 RAD21 RFX5 ARID2 POLR2A SMC3 ZNF143 IKZF2 BCLAF1 HLA-DMB HLA-Z GC06M032900
GH06I032935 Enhancer 0.8 ENCODE dbSUPER 0.3 +40.4 40409 1.9 NFRKB ZBED1 ELF4 ZBTB40 ZBTB5 POLR2A NFATC1 BCLAF1 HLA-DMA HLA-DRB6 CYP21A1P HLA-DPA1 HLA-DMB ENSG00000248993 HLA-Z GC06M032900
GH06I032920 Enhancer 0.5 Ensembl 0.3 +24.5 24499 0.2 SP1 FOXA2 JUNB SPI1 HLA-DMB HLA-Z GC06M032900
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HLA-Z on UCSC Golden Path with GeneCards custom track

Genomic Locations for HLA-Z Gene

Genomic Locations for HLA-Z Gene
chr6:32,896,402-32,896,490
(GRCh38/hg38)
Size:
89 bases
Orientation:
Plus strand
chr6:32,864,179-32,864,267
(GRCh37/hg19)

Genomic View for HLA-Z Gene

Genes around HLA-Z on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-Z Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-Z Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-Z Gene

Post-translational modifications for HLA-Z Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-Z Gene

Domains & Families for HLA-Z Gene

Gene Families for HLA-Z Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-Z: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-Z Gene

Function for HLA-Z Gene

Phenotypes From GWAS Catalog for HLA-Z Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-Z Gene

Localization for HLA-Z Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-Z Gene

Pathways & Interactions for HLA-Z Gene

SuperPathways for HLA-Z Gene

No Data Available

Interacting Proteins for HLA-Z Gene

Gene Ontology (GO) - Biological Process for HLA-Z Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-Z Gene

Drugs & Compounds for HLA-Z Gene

No Compound Related Data Available

Transcripts for HLA-Z Gene

mRNA/cDNA for HLA-Z Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-Z Gene

No ASD Table

Relevant External Links for HLA-Z Gene

GeneLoc Exon Structure for
HLA-Z
ECgene alternative splicing isoforms for
HLA-Z

Expression for HLA-Z Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-Z Gene

Orthologs for HLA-Z Gene

Evolution for HLA-Z Gene

ENSEMBL:
Gene Tree for HLA-Z (if available)
TreeFam:
Gene Tree for HLA-Z (if available)

No data available for Orthologs for HLA-Z Gene

Paralogs for HLA-Z Gene

No data available for Paralogs for HLA-Z Gene

Variants for HLA-Z Gene

Additional Variant Information for HLA-Z Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-Z

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-Z Gene

Disorders for HLA-Z Gene

Additional Disease Information for HLA-Z

Genetic Association Database
(GAD)

No disorders were found for HLA-Z Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-Z Gene

Publications for HLA-Z Gene

  1. Evolutionary dynamics of non-coding sequences within the class II region of the human MHC. (PMID: 8568858) Beck S … Trowsdale J (Journal of molecular biology 1996) 2 3 58
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 44 58

Products for HLA-Z Gene

Sources for HLA-Z Gene

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