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Aliases for HLA-X Gene

Aliases for HLA-X Gene

  • Major Histocompatibility Complex, Class I, X (Pseudogene) 2 3

External Ids for HLA-X Gene

Previous GeneCards Identifiers for HLA-X Gene

  • GC06U900020
  • GC06M031431
  • GC06M031433
  • GC06M031444

Summaries for HLA-X Gene

GeneCards Summary for HLA-X Gene

HLA-X (Major Histocompatibility Complex, Class I, X (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-X Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-X Gene

Genomics for HLA-X Gene

Regulatory Elements for HLA-X Gene

Enhancers for HLA-X Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H031461 1.2 ENCODE dbSUPER 0.7 -0.8 -751 2.7 TBP ATF1 RB1 ARID4B ZNF76 BRCA1 YY1 RFX5 ZNF366 ZNF207 HLA-C MICB PSORS1C2 MICA HLA-B SKIV2L MICA-AS1 ENSG00000272501 ENSG00000233902 HLA-X
GH06H031441 1.1 Ensembl ENCODE 0.3 +20.7 20686 0.5 CTCF IRF2 RB1 SAP130 ARID4B ZNF2 KMT2B RAD21 RFX5 CC2D1A MICA-AS1 MICB PPIAP9 MCCD1 ENSG00000225499 SNORD117 DDX39B ENSG00000271581 STK19B ENSG00000199332
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HLA-X on UCSC Golden Path with GeneCards custom track

Promoters for HLA-X Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000195544 -1010 1401 TBP ATF1 TBL1XR1 RB1 ZFP64 ARID4B ZNF76 BRCA1 YY1 RFX5

Genomic Locations for HLA-X Gene

Genomic Locations for HLA-X Gene
645 bases
Minus strand

Genomic View for HLA-X Gene

Genes around HLA-X on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-X Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-X Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HLA-X Gene

Proteins for HLA-X Gene

Post-translational modifications for HLA-X Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-X Gene

Domains & Families for HLA-X Gene

Gene Families for HLA-X Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-X: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-X Gene

Function for HLA-X Gene

Molecular function for HLA-X Gene

GENATLAS Biochemistry:
HLA class I-like gene X

Phenotypes From GWAS Catalog for HLA-X Gene

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-X Gene

Localization for HLA-X Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-X Gene

Pathways & Interactions for HLA-X Gene

SuperPathways for HLA-X Gene

No Data Available

Interacting Proteins for HLA-X Gene

Gene Ontology (GO) - Biological Process for HLA-X Gene


No data available for Pathways by source and SIGNOR curated interactions for HLA-X Gene

Drugs & Compounds for HLA-X Gene

No Compound Related Data Available

Transcripts for HLA-X Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-X Gene

No ASD Table

Relevant External Links for HLA-X Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for HLA-X Gene

Expression for HLA-X Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-X Gene

Orthologs for HLA-X Gene

No data available for Orthologs and Evolution for HLA-X Gene

Paralogs for HLA-X Gene

No data available for Paralogs for HLA-X Gene

Variants for HLA-X Gene

Relevant External Links for HLA-X Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-X Gene

Disorders for HLA-X Gene

No disorders were found for HLA-X Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HLA-X Gene

Publications for HLA-X Gene

  1. A novel coding sequence belonging to a new multicopy gene family mapping within the human MHC class I region. (PMID: 8462994) Vernet C … Pontarotti P (Immunogenetics 1993) 2 3 60
  2. Physical mapping between the S and HLA-E genes in the human MHC class I region: construction of a BAC, PAC, and cosmid contig. (PMID: 9799336) Shiina T … Inoko H (Immunogenetics 1998) 3 60

Products for HLA-X Gene

Sources for HLA-X Gene

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