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Aliases for HLA-W Gene

Aliases for HLA-W Gene

  • Major Histocompatibility Complex, Class I, W (Pseudogene) 2 3 5
  • HLA-80 Pseudogene 2 3
  • HLA-80 3

External Ids for HLA-W Gene

Previous HGNC Symbols for HLA-W Gene

  • HLA-80

Previous GeneCards Identifiers for HLA-W Gene

  • GC06P030032
  • GC06P030035
  • GC06P029923
  • GC06P029722
  • GC06P030097
  • GC06P030196
  • GC06P030346

Summaries for HLA-W Gene

GeneCards Summary for HLA-W Gene

HLA-W (Major Histocompatibility Complex, Class I, W (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-W Gene

Genomics for HLA-W Gene

Regulatory Elements for HLA-W Gene

Enhancers for HLA-W Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around HLA-W on UCSC Golden Path with GeneCards custom track

Genomic Location for HLA-W Gene

29,955,834 bp from pter
29,959,058 bp from pter
3,225 bases
Plus strand

Genomic View for HLA-W Gene

Genes around HLA-W on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-W Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-W Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-W Gene

Post-translational modifications for HLA-W Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-W Gene

Domains & Families for HLA-W Gene

Gene Families for HLA-W Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-W: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-W Gene

Function for HLA-W Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-W Gene

Localization for HLA-W Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HLA-W Gene

Pathways & Interactions for HLA-W Gene

SuperPathways for HLA-W Gene

No Data Available

Interacting Proteins for HLA-W Gene

Gene Ontology (GO) - Biological Process for HLA-W Gene


No data available for Pathways by source and SIGNOR curated interactions for HLA-W Gene

Drugs & Compounds for HLA-W Gene

No Compound Related Data Available

Transcripts for HLA-W Gene

mRNA/cDNA for HLA-W Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-W Gene

No ASD Table

Relevant External Links for HLA-W Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HLA-W Gene

mRNA expression in normal human tissues for HLA-W Gene

mRNA differential expression in normal tissues according to GTEx for HLA-W Gene

This gene is overexpressed in Whole Blood (x10.0).
genes like me logo Genes that share expression patterns with HLA-W: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HLA-W Gene

Orthologs for HLA-W Gene

Evolution for HLA-W Gene

Gene Tree for HLA-W (if available)
Gene Tree for HLA-W (if available)

No data available for Orthologs for HLA-W Gene

Paralogs for HLA-W Gene

No data available for Paralogs for HLA-W Gene

Variants for HLA-W Gene

Relevant External Links for HLA-W Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-W Gene

Disorders for HLA-W Gene

Relevant External Links for HLA-W

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator

No disorders were found for HLA-W Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-W Gene

Publications for HLA-W Gene

  1. Host determinants of HIV-1 control in African Americans. (PMID: 20205591) Pelak K. … . (J. Infect. Dis. 2010) 3 46 65
  2. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T. … Inoko H. (Proc. Natl. Acad. Sci. U.S.A. 1999) 2 3 65
  3. The HLA class I gene family includes at least six genes and twelve pseudogenes and gene fragments. (PMID: 1517563) Geraghty D.E. … Orr H.T. (J. Immunol. 1992) 2 3 65
  4. A genome-wide association study of plasma total IgE concentrations in the Framingham Heart Study. (PMID: 22075330) Granada M. … O'Connor G.T. (J. Allergy Clin. Immunol. 2012) 46 65

Products for HLA-W Gene

Sources for HLA-W Gene

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