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Aliases for HLA-V Gene

Aliases for HLA-V Gene

  • Major Histocompatibility Complex, Class I, V (Pseudogene) 2 3 5
  • HLA-75 Pseudogene 2 3
  • DJ377H14.4 3
  • HLA-75 3

External Ids for HLA-V Gene

Previous HGNC Symbols for HLA-V Gene

  • HLA-75

Previous GeneCards Identifiers for HLA-V Gene

  • GC06Pc29901
  • GC06P029760
  • GC06P029762
  • GC06P029563
  • GC06P029764
  • GC06P029769
  • GC06P030023
  • GC06P030175
  • GC06P030015
  • GC06P030084
  • GC06P030328
  • GC06P030480
  • GC06P030680

Summaries for HLA-V Gene

GeneCards Summary for HLA-V Gene

HLA-V (Major Histocompatibility Complex, Class I, V (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-V Gene

Genomics for HLA-V Gene

Regulatory Elements for HLA-V Gene

Enhancers for HLA-V Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G029907 0.8 ENCODE 18.5 +117.8 117798 2.7 FOXA2 ZFP64 CEBPG THRB RAD21 RARA FOSL1 NCOR1 HNF4G FOSL2 HLA-J HLA-G HCG4 HLA-A ZFP57 HCG4P7 HLA-V MICD HLA-H HCG4P3
GH06G029886 0.8 ENCODE 12.3 +96.8 96781 3.0 CTCF IRF2 SUZ12 BACH1 SIN3A ASH2L RBBP5 YY1 RFX5 POLR2A HLA-J HLA-H HLA-A ZFP57 HCG4P5 HCG4P7 MICD HLA-K ZNRD1 HCG4P3
GH06G030735 1.4 Ensembl ENCODE dbSUPER 5 +946.2 946156 2.9 HDAC1 HDGF TBP PKNOX1 WRNIP1 BMI1 ZBTB40 GATA2 ZNF366 ELK1 PTMAP1 ATAT1 PPP1R10 MRPS18B MDC1-AS1 PSORS1C2 C6orf136 DHX16 VARS2 TRIM31
GH06G030725 1.2 ENCODE dbSUPER 5.8 +935.1 935133 1.5 HNRNPUL1 ATF1 ARNT AGO1 ZFP64 ARID4B SIN3A BMI1 ZNF2 ZNF48 MICD HLA-U HLA-V DHX16 HCG4 TRIM31 FLOT1 PIR41687 GC06M030736 ENSG00000201988
GH06G030739 1.4 ENCODE dbSUPER 4.9 +952.0 951952 6.5 MLX CREB3L1 AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 DHX16 PPP1R10 GNL1 RPL3P2 TRIM26 ABCF1 DDX39B LINC00243 MDC1 HLA-E
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HLA-V on UCSC Golden Path with GeneCards custom track

Promoters for HLA-V Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000195335 1546 1001 CTCF CBX3 PKNOX1 TAL1 MAX RAD21 YY1 TCF12 POLR2A CBX5

Genomic Location for HLA-V Gene

Chromosome:
6
Start:
29,790,954 bp from pter
End:
29,797,811 bp from pter
Size:
6,858 bases
Orientation:
Plus strand

Genomic View for HLA-V Gene

Genes around HLA-V on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-V Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-V Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-V Gene

Post-translational modifications for HLA-V Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-V Gene

Domains & Families for HLA-V Gene

Gene Families for HLA-V Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-V: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-V Gene

Function for HLA-V Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-V Gene

Localization for HLA-V Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HLA-V Gene

Pathways & Interactions for HLA-V Gene

SuperPathways for HLA-V Gene

No Data Available

Interacting Proteins for HLA-V Gene

Gene Ontology (GO) - Biological Process for HLA-V Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-V Gene

Transcripts for HLA-V Gene

mRNA/cDNA for HLA-V Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-V Gene

No ASD Table

Relevant External Links for HLA-V Gene

GeneLoc Exon Structure for
HLA-V
ECgene alternative splicing isoforms for
HLA-V

Expression for HLA-V Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HLA-V Gene

mRNA differential expression in normal tissues according to GTEx for HLA-V Gene

This gene is overexpressed in Testis (x9.9) and Lung (x9.1).
genes like me logo Genes that share expression patterns with HLA-V: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-V Gene

Orthologs for HLA-V Gene

Evolution for HLA-V Gene

ENSEMBL:
Gene Tree for HLA-V (if available)
TreeFam:
Gene Tree for HLA-V (if available)

No data available for Orthologs for HLA-V Gene

Paralogs for HLA-V Gene

No data available for Paralogs for HLA-V Gene

Variants for HLA-V Gene

Relevant External Links for HLA-V Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-V

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-V Gene

Disorders for HLA-V Gene

No disorders were found for HLA-V Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HLA-V Gene

Publications for HLA-V Gene

  1. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T. … Inoko H. (Proc. Natl. Acad. Sci. U.S.A. 1999) 3 64
  2. The HLA class I gene family includes at least six genes and twelve pseudogenes and gene fragments. (PMID: 1517563) Geraghty D.E. … Orr H.T. (J. Immunol. 1992) 3 64
  3. Examination of four HLA class I pseudogenes. Common events in the evolution of HLA genes and pseudogenes. (PMID: 1517564) Geraghty D.E. … Hansen J.A. (J. Immunol. 1992) 3 64

Products for HLA-V Gene

Sources for HLA-V Gene

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