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Aliases for HLA-V Gene

Aliases for HLA-V Gene

  • Major Histocompatibility Complex, Class I, V (Pseudogene) 2 3 5
  • HLA-75 Pseudogene 2 3
  • DJ377H14.4 3
  • HLA-75 3

External Ids for HLA-V Gene

Previous HGNC Symbols for HLA-V Gene

  • HLA-75

Previous GeneCards Identifiers for HLA-V Gene

  • GC06Pc29901
  • GC06P029760
  • GC06P029762
  • GC06P029563
  • GC06P029764
  • GC06P029769
  • GC06P030023
  • GC06P030175
  • GC06P030015
  • GC06P030084
  • GC06P030328
  • GC06P030480

Summaries for HLA-V Gene

GeneCards Summary for HLA-V Gene

HLA-V (Major Histocompatibility Complex, Class I, V (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-V Gene

Genomics for HLA-V Gene

Regulatory Elements for HLA-V Gene

Enhancers for HLA-V Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F029907 0.8 ENCODE 18.5 +117.8 117798 2.7 ZFP64 CEBPG THRB RARA HNF4G FOS NR2F6 FOSL2 MIXL1 GATAD2A HLA-J HLA-G HCG4 HLA-A ZFP57 HCG4P7 HLA-V MICD HLA-H HCG4P3
GH06F029886 0.7 ENCODE 12.3 +96.8 96781 3.0 CTCF CBFB SIN3A ASH2L TBX21 NR2F2 RFX5 POLR2A IKZF1 MLLT1 HLA-J HLA-H HLA-A ZFP57 HCG4P5 HCG4P7 MICD HLA-K ZNRD1 HCG4P3
GH06F030739 1.2 ENCODE 4.9 +952.0 951952 6.5 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC MEF2D RPL7P4 DHX16 TMPOP1 UBQLN1P1 SNORA38 ENSG00000233902 HLA-P PPP1R10 GNL1 RPL3P2
GH06F030735 1.1 Ensembl ENCODE 5 +946.2 946156 2.9 HDGF TBP PKNOX1 WRNIP1 BMI1 ZBTB40 ZNF366 GATA2 ELK1 ZNF143 PTMAP1 ATAT1 MRPS18B PPP1R10 PSORS1C2 MDC1-AS1 C6orf136 DHX16 VARS2 TRIM31
GH06F030725 0.9 ENCODE 5.8 +935.1 935133 1.5 ATF1 ZFP64 ARID4B SIN3A BMI1 ZNF48 ZNF2 RARA ZNF121 ZNF366 MICD HLA-U HLA-V DHX16 HCG4 TRIM31 FLOT1 PIR41687 ENSG00000201988 GC06M030736
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HLA-V on UCSC Golden Path with GeneCards custom track

Promoters for HLA-V Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000129670 1347 1800 CTCF CBX3 PKNOX1 TAL1 RAD21 YY1 POLR2A MTA1 CBX5 GABPB1

Genomic Location for HLA-V Gene

Chromosome:
6
Start:
29,790,954 bp from pter
End:
29,797,811 bp from pter
Size:
6,858 bases
Orientation:
Plus strand

Genomic View for HLA-V Gene

Genes around HLA-V on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-V Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-V Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-V Gene

Post-translational modifications for HLA-V Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-V Gene

Domains & Families for HLA-V Gene

Gene Families for HLA-V Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-V: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-V Gene

Function for HLA-V Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-V Gene

Localization for HLA-V Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HLA-V Gene

Pathways & Interactions for HLA-V Gene

SuperPathways for HLA-V Gene

No Data Available

Interacting Proteins for HLA-V Gene

Gene Ontology (GO) - Biological Process for HLA-V Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-V Gene

Transcripts for HLA-V Gene

mRNA/cDNA for HLA-V Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-V Gene

No ASD Table

Relevant External Links for HLA-V Gene

GeneLoc Exon Structure for
HLA-V
ECgene alternative splicing isoforms for
HLA-V

Expression for HLA-V Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HLA-V Gene

mRNA differential expression in normal tissues according to GTEx for HLA-V Gene

This gene is overexpressed in Testis (x9.9) and Lung (x9.1).
genes like me logo Genes that share expression patterns with HLA-V: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HLA-V Gene

Orthologs for HLA-V Gene

Evolution for HLA-V Gene

ENSEMBL:
Gene Tree for HLA-V (if available)
TreeFam:
Gene Tree for HLA-V (if available)

No data available for Orthologs for HLA-V Gene

Paralogs for HLA-V Gene

No data available for Paralogs for HLA-V Gene

Variants for HLA-V Gene

Relevant External Links for HLA-V Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-V

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-V Gene

Disorders for HLA-V Gene

No disorders were found for HLA-V Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HLA-V Gene

Publications for HLA-V Gene

  1. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T. … Inoko H. (Proc. Natl. Acad. Sci. U.S.A. 1999) 3 64
  2. The HLA class I gene family includes at least six genes and twelve pseudogenes and gene fragments. (PMID: 1517563) Geraghty D.E. … Orr H.T. (J. Immunol. 1992) 3 64
  3. Examination of four HLA class I pseudogenes. Common events in the evolution of HLA genes and pseudogenes. (PMID: 1517564) Geraghty D.E. … Hansen J.A. (J. Immunol. 1992) 3 64

Products for HLA-V Gene

Sources for HLA-V Gene

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