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Aliases for HLA-V Gene

Aliases for HLA-V Gene

  • Major Histocompatibility Complex, Class I, V (Pseudogene) 2 3 5
  • HLA-75 Pseudogene 2 3
  • Histocompatibility Antigen-Related 3
  • DJ377H14.4 3
  • HLA-75 3

External Ids for HLA-V Gene

Previous HGNC Symbols for HLA-V Gene

  • HLA-75

Previous GeneCards Identifiers for HLA-V Gene

  • GC06Pc29901
  • GC06P029760
  • GC06P029762
  • GC06P029563
  • GC06P029764
  • GC06P029769
  • GC06P030023
  • GC06P030175
  • GC06P030015
  • GC06P030084
  • GC06P030328
  • GC06P030480
  • GC06P030680
  • GC06P030843

Summaries for HLA-V Gene

GeneCards Summary for HLA-V Gene

HLA-V (Major Histocompatibility Complex, Class I, V (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-V Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-V Gene

Genomics for HLA-V Gene

Regulatory Elements for HLA-V Gene

Enhancers for HLA-V Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H029907 0.8 ENCODE 18.5 +117.8 117798 2.7 FOXA2 ZFP64 CEBPG THRB RAD21 RARA FOSL1 HNF4G FOSL2 FOS HLA-J HLA-G HCG4 HLA-A ZFP57 ERVK9-12 HLA-V MICD HLA-H ENSG00000237669
GH06H029886 0.7 ENCODE 12.3 +96.8 96781 3 IRF2 BACH1 YY1 RFX5 POLR2A ZSCAN29 RUNX3 IKZF2 EZH2 ZNF687 HLA-J HLA-H HLA-A ZFP57 ENSG00000227766 ERVK9-12 MICD HLA-K ZNRD1 ENSG00000237669
GH06H030735 1.4 Ensembl ENCODE dbSUPER 5 +946.2 946156 2.9 HDAC1 HDGF PKNOX1 RB1 BMI1 BATF RFX5 GATA2 ZNF366 ZNF143 PTMAP1 ATAT1 PPP1R10 MRPS18B PSORS1C2 MDC1-AS1 C6orf136 DHX16 VARS2 TRIM31
GH06H030739 1.4 ENCODE dbSUPER 4.9 +952.0 951952 6.5 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D SSRP1 LY6G5B MDC1 DDX39B DHX16 PPP1R10 RPL3P2 RPL7P4 NRM ZNRD1 TRIM26
GH06H030725 1.1 ENCODE dbSUPER 5.8 +935.1 935133 1.5 HNRNPUL1 ATF1 ARNT ZFP64 ARID4B BMI1 ZNF2 RARA ZNF121 EGR1 NRM TRIM39 DHX16 DDX39B LY6G5B ZNRD1 TCF19 MICD MDC1 CSNK2B
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HLA-V on UCSC Golden Path with GeneCards custom track

Promoters for HLA-V Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000195335 1546 1001 CTCF PKNOX1 NR2F1 MAX RAD21 YY1 MTA1 TARDBP KLF9 FOXP2

Genomic Locations for HLA-V Gene

Genomic Locations for HLA-V Gene
chr6:29,790,954-29,797,811
(GRCh38/hg38)
Size:
6,858 bases
Orientation:
Plus strand
chr6:29,758,731-29,765,588
(GRCh37/hg19)

Genomic View for HLA-V Gene

Genes around HLA-V on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-V Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-V Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-V Gene

Post-translational modifications for HLA-V Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-V Gene

Domains & Families for HLA-V Gene

Gene Families for HLA-V Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-V: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-V Gene

Function for HLA-V Gene

Phenotypes From GWAS Catalog for HLA-V Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-V Gene

Localization for HLA-V Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-V Gene

Pathways & Interactions for HLA-V Gene

SuperPathways for HLA-V Gene

No Data Available

Interacting Proteins for HLA-V Gene

Gene Ontology (GO) - Biological Process for HLA-V Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-V Gene

Drugs & Compounds for HLA-V Gene

No Compound Related Data Available

Transcripts for HLA-V Gene

mRNA/cDNA for HLA-V Gene

(1) REFSEQ mRNAs :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-V Gene

No ASD Table

Relevant External Links for HLA-V Gene

GeneLoc Exon Structure for
HLA-V
ECgene alternative splicing isoforms for
HLA-V

Expression for HLA-V Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HLA-V Gene

mRNA differential expression in normal tissues according to GTEx for HLA-V Gene

This gene is overexpressed in Testis (x9.9) and Lung (x9.1).
genes like me logo Genes that share expression patterns with HLA-V: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-V Gene

Orthologs for HLA-V Gene

Evolution for HLA-V Gene

ENSEMBL:
Gene Tree for HLA-V (if available)
TreeFam:
Gene Tree for HLA-V (if available)

No data available for Orthologs for HLA-V Gene

Paralogs for HLA-V Gene

No data available for Paralogs for HLA-V Gene

Variants for HLA-V Gene

Relevant External Links for HLA-V Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-V

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-V Gene

Disorders for HLA-V Gene

Relevant External Links for HLA-V

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
HLA-V

No disorders were found for HLA-V Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-V Gene

Publications for HLA-V Gene

  1. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 60
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin EL … Gygi SP (Cell 2015) 3 60
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) Oláh J … Ovádi J (The Journal of biological chemistry 2011) 3 60
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60
  5. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T … Inoko H (Proceedings of the National Academy of Sciences of the United States of America 1999) 3 60

Products for HLA-V Gene

Sources for HLA-V Gene

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