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Aliases for HLA-T Gene

Aliases for HLA-T Gene

  • Major Histocompatibility Complex, Class I, T (Pseudogene) 2 3
  • HLA-16 Pseudogene 2 3
  • HLA-16 3

External Ids for HLA-T Gene

Previous HGNC Symbols for HLA-T Gene

  • HLA-16

Previous GeneCards Identifiers for HLA-T Gene

  • GC06P029975
  • GC06Pc30002
  • GC06P029865
  • GC06P029669
  • GC06P030069
  • GC06P030180

Summaries for HLA-T Gene

GeneCards Summary for HLA-T Gene

HLA-T (Major Histocompatibility Complex, Class I, T (Pseudogene)) is a Pseudogene. Diseases associated with HLA-T include microscopic colitis.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-T Gene

Genomics for HLA-T Gene

Genomic Location for HLA-T Gene

29,896,443 bp from pter
29,898,947 bp from pter
2,505 bases
Plus strand

Genomic View for HLA-T Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HLA-T Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Regulatory Elements for HLA-T Gene

Proteins for HLA-T Gene

Post-translational modifications for HLA-T Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-T Gene

Domains for HLA-T Gene

Gene Families for HLA-T Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-T: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-T Gene

Function for HLA-T Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-T Gene

Localization for HLA-T Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HLA-T Gene

Pathways for HLA-T Gene

SuperPathways for HLA-T Gene

No Data Available

Interacting Proteins for HLA-T Gene

Gene Ontology (GO) - Biological Process for HLA-T Gene


No data available for Pathways by source for HLA-T Gene

Transcripts for HLA-T Gene

mRNA/cDNA for HLA-T Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-T Gene

No ASD Table

Relevant External Links for HLA-T Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HLA-T Gene

mRNA expression in normal human tissues for HLA-T Gene

mRNA differential expression in normal tissues according to GTEx for HLA-T Gene

This gene is overexpressed in Whole Blood (6.6).
genes like me logo Genes that share expressions with HLA-T: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for HLA-T Gene

Orthologs for HLA-T Gene

Evolution for HLA-T Gene

Gene Tree for HLA-T (if available)
Gene Tree for HLA-T (if available)

No data available for Orthologs for HLA-T Gene

Paralogs for HLA-T Gene

No data available for Paralogs for HLA-T Gene

Variants for HLA-T Gene

Relevant External Links for HLA-T Gene

HapMap Linkage Disequilibrium report
Locus Specific Mutation Databases (LSDB)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for HLA-T Gene

Disorders for HLA-T Gene

MalaCards: The human disease database

MalaCards: The human disease database.

Search for HLA-T Gene in MalaCards »

(1) Disease for HLA-T Gene

Relevant External Links for HLA-T

Human Genome Epidemiology (HuGE) Navigator
genes like me logo Genes that share disorders with HLA-T: view

No data available for OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for HLA-T Gene

Publications for HLA-T Gene

  1. The HLA class I gene family includes at least six genes and twelve pseudogenes and gene fragments. (PMID: 1517563) Geraghty D.E. … Orr H.T. (J. Immunol. 1992) 3
  2. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T. … Inoko H. (Proc. Natl. Acad. Sci. U.S.A. 1999) 3
  3. Predisposing HLA-DQ2 and HLA-DQ8 haplotypes of coeliac disease and associated enteropathy in microscopic colitis. (PMID: 16292086) FernA!ndez-BaA+ares F. … Viver J.M. (Eur J Gastroenterol Hepatol 2005) 3
  4. [High resolution DNA typing for HLA-A, B, Cw genes by polymerase chain reaction-sequence specific oligonucleotide probes method in the Shenyang Han population]. (PMID: 16331567) Han S.X. … Song F.J. (Zhonghua Yi Xue Yi Chuan Xue Za Zhi 2005) 3
  5. HLA alleles and haplotypes in French North African immigrants. (PMID: 16829309) PAcdron B. … Sterkers G. (Hum. Immunol. 2006) 3

Products for HLA-T Gene

Sources for HLA-T Gene

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