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Aliases for HLA-S Gene

Aliases for HLA-S Gene

  • Major Histocompatibility Complex, Class I, S (Pseudogene) 2 3
  • HLA-17 3

External Ids for HLA-S Gene

Previous GeneCards Identifiers for HLA-S Gene

  • GC06U900019
  • GC06M031458
  • GC06M031350
  • GC06M031140
  • GC06M031356
  • GC06M031371

Summaries for HLA-S Gene

GeneCards Summary for HLA-S Gene

HLA-S (Major Histocompatibility Complex, Class I, S (Pseudogene)) is a Pseudogene. Diseases associated with HLA-S include mesial temporal lobe epilepsy with hippocampal sclerosis and t-cell prolymphocytic leukemia.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-S Gene

Genomics for HLA-S Gene

Genomic Location for HLA-S Gene

Chromosome:
6
Start:
31,381,569 bp from pter
End:
31,382,487 bp from pter
Size:
919 bases
Orientation:
Minus strand

Genomic View for HLA-S Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

No data available for Regulatory Elements for HLA-S Gene

Proteins for HLA-S Gene

Post-translational modifications for HLA-S Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-S Gene

Domains & Families for HLA-S Gene

Gene Families for HLA-S Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-S: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-S Gene

Function for HLA-S Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-S Gene

Localization for HLA-S Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for HLA-S Gene COMPARTMENTS Subcellular localization image for HLA-S gene
Compartment Confidence
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for HLA-S Gene

Pathways & Interactions for HLA-S Gene

SuperPathways for HLA-S Gene

No Data Available

Interacting Proteins for HLA-S Gene

Gene Ontology (GO) - Biological Process for HLA-S Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-S Gene

Drugs & Compounds for HLA-S Gene

(3) Drugs for HLA-S Gene - From: NovoSeek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Cyclophosphamide Approved, Investigational Pharma Nitrogen mustard alkylating agent and prodrug. 2525
Methotrexate Approved Pharma Folate antagonist,inhibits DFHR 1387
Cyclosporin A Pharma Inhibition, Inhibitor Immunosuppressive agent, Calcineurin inhibitor 0
genes like me logo Genes that share compounds with HLA-S: view

Transcripts for HLA-S Gene

mRNA/cDNA for HLA-S Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-S Gene

No ASD Table

Relevant External Links for HLA-S Gene

GeneLoc Exon Structure for
HLA-S
ECgene alternative splicing isoforms for
HLA-S

Expression for HLA-S Gene

mRNA expression in normal human tissues for HLA-S Gene

genes like me logo Genes that share expression patterns with HLA-S: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HLA-S Gene

Orthologs for HLA-S Gene

Evolution for HLA-S Gene

ENSEMBL:
Gene Tree for HLA-S (if available)
TreeFam:
Gene Tree for HLA-S (if available)

No data available for Orthologs for HLA-S Gene

Paralogs for HLA-S Gene

No data available for Paralogs for HLA-S Gene

Variants for HLA-S Gene

Relevant External Links for HLA-S Gene

HapMap Linkage Disequilibrium report
HLA-S

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-S Gene

Disorders for HLA-S Gene

MalaCards: The human disease database

(4) MalaCards diseases for HLA-S Gene - From: DISEASES and GeneCards

- elite association
Search HLA-S in MalaCards View complete list of genes associated with diseases

Relevant External Links for HLA-S

Genetic Association Database (GAD)
HLA-S
genes like me logo Genes that share disorders with HLA-S: view

No data available for UniProtKB/Swiss-Prot and Genatlas for HLA-S Gene

Publications for HLA-S Gene

  1. Human leukocyte antigen alleles and the response to pegylated interferon/ribavirin therapy in chronic hepatitis C patients. (PMID: 19931565) Dai C.Y. … Yu M.L. (Antiviral Res. 2010) 23 67
  2. The MHC motif viewer: a visualization tool for MHC binding motifs. (PMID: 20143317) Rapin N. … Nielsen M. (Curr Protoc Immunol 2010) 23 67
  3. Molecular analysis of endothelial progenitor cell (EPC) subtypes reveals two distinct cell populations with different identities. (PMID: 20465783) Medina R.J. … Stitt A.W. (BMC Med Genomics 2010) 23 67
  4. Cytomegalovirus-specific CD8(+) T cells targeting different HLA/peptide combinations correlate with protection but at different threshold frequencies. (PMID: 20095088) Giest S. … Travers P.J. (Br. J. Haematol. 2010) 23 67
  5. The role of human leucocyte antigens in children with hydatid disease: their association with clinical condition and prognosis. (PMID: 20111876) Yalcin E. … Ersoy F. (Parasitol. Res. 2010) 23 67

Products for HLA-S Gene

Sources for HLA-S Gene

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