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Aliases for HLA-P Gene

Aliases for HLA-P Gene

  • Major Histocompatibility Complex, Class I, P (Pseudogene) 2 3 5
  • HLA-90 Pseudogene 2 3
  • Chromosome 6 Open Reading Frame 101 2
  • DJ377H14.3 3
  • C6orf101 3
  • HLA-90 3

External Ids for HLA-P Gene

Previous HGNC Symbols for HLA-P Gene

  • C6orf101
  • HLA-90

Previous GeneCards Identifiers for HLA-P Gene

  • GC06Pc29909
  • GC06P029761
  • GC06P029763
  • GC06P029572
  • GC06P029765
  • GC06P029773
  • GC06P030024
  • GC06P030176
  • GC06P030022
  • GC06P030086
  • GC06P030329
  • GC06P030481
  • GC06P030681
  • GC06P030844

Summaries for HLA-P Gene

GeneCards Summary for HLA-P Gene

HLA-P (Major Histocompatibility Complex, Class I, P (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-P Gene

Genomics for HLA-P Gene

Regulatory Elements for HLA-P Gene

Enhancers for HLA-P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H030678 1.9 FANTOM5 ENCODE dbSUPER 14.6 +885.3 885282 13 MLX DMAP1 YBX1 YY1 SLC30A9 ZNF416 ZNF143 SP3 NFYC MEF2D PPP1R10 MDC1 IER3 NRM TRIM39 RPL7P4 DHX16 ABCF1 HLA-E PPP1R18
GH06H030611 1.7 Ensembl ENCODE dbSUPER 14.6 +815.5 815509 8 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D SSRP1 MDC1 DDX39B TRIM39 PPP1R10 ABCF1 NRM DHX16 ZNRD1 GTF2H4 TRIM26
GH06H030715 1.5 ENCODE dbSUPER 14.6 +919.5 919483 7 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 SP3 NFYC MDC1 LY6G5B TRIM39 DDX39B DHX16 ABCF1 PPP1R10 ZNRD1 NRM HCG18
GH06H030739 1.4 ENCODE dbSUPER 14.6 +942.9 942862 6 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC MEF2D SSRP1 LY6G5B MDC1 DDX39B DHX16 PPP1R10 RPL3P2 RPL7P4 NRM ZNRD1 TRIM26
GH06H030065 1.2 ENCODE 14.6 +266.8 266762 2 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A DMAP1 YBX1 ZNF2 ENSG00000237669 TRIM26 TRIM39 MDC1 PPP1R10 ZNRD1 HLA-A RPL7P4 ETF1P1 ENSG00000233892
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HLA-P on UCSC Golden Path with GeneCards custom track

Genomic Location for HLA-P Gene

Chromosome:
6
Start:
29,800,044 bp from pter
End:
29,803,079 bp from pter
Size:
3,036 bases
Orientation:
Plus strand

Genomic View for HLA-P Gene

Genes around HLA-P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-P Gene

Post-translational modifications for HLA-P Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-P Gene

Domains & Families for HLA-P Gene

Gene Families for HLA-P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-P Gene

Function for HLA-P Gene

Phenotypes From GWAS Catalog for HLA-P Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HLA-P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-P Gene

Localization for HLA-P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-P Gene

Pathways & Interactions for HLA-P Gene

SuperPathways for HLA-P Gene

No Data Available

Interacting Proteins for HLA-P Gene

Gene Ontology (GO) - Biological Process for HLA-P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-P Gene

Drugs & Compounds for HLA-P Gene

No Compound Related Data Available

Transcripts for HLA-P Gene

mRNA/cDNA for HLA-P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HLA-P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-P Gene

No ASD Table

Relevant External Links for HLA-P Gene

GeneLoc Exon Structure for
HLA-P
ECgene alternative splicing isoforms for
HLA-P

Expression for HLA-P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HLA-P Gene

mRNA differential expression in normal tissues according to GTEx for HLA-P Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with HLA-P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-P Gene

Orthologs for HLA-P Gene

Evolution for HLA-P Gene

ENSEMBL:
Gene Tree for HLA-P (if available)
TreeFam:
Gene Tree for HLA-P (if available)

No data available for Orthologs for HLA-P Gene

Paralogs for HLA-P Gene

No data available for Paralogs for HLA-P Gene

Variants for HLA-P Gene

Relevant External Links for HLA-P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-P Gene

Disorders for HLA-P Gene

No disorders were found for HLA-P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HLA-P Gene

Publications for HLA-P Gene

  1. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T … Inoko H (Proceedings of the National Academy of Sciences of the United States of America 1999) 3 60
  2. The HLA class I gene family includes at least six genes and twelve pseudogenes and gene fragments. (PMID: 1517563) Geraghty DE … Orr HT (Journal of immunology (Baltimore, Md. : 1950) 1992) 3 60

Products for HLA-P Gene

Sources for HLA-P Gene

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