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Aliases for HLA-N Gene

Aliases for HLA-N Gene

  • Major Histocompatibility Complex, Class I, N (Pseudogene) 2 3 5
  • HLA-30 3

External Ids for HLA-N Gene

Previous GeneCards Identifiers for HLA-N Gene

  • GC06U900018
  • GC06P030427
  • GC06P030319
  • GC06P030116
  • GC06P030448

Summaries for HLA-N Gene

GeneCards Summary for HLA-N Gene

HLA-N (Major Histocompatibility Complex, Class I, N (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-N Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-N Gene

Genomics for HLA-N Gene

Regulatory Elements for HLA-N Gene

Enhancers for HLA-N Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H030357 1 Ensembl ENCODE 0.4 +6.6 6571 0.8 CTCF ZNF777 ZNF384 RAD21 ZFHX2 ZNF766 GLIS2 ZNF366 POLR2A PATZ1 MICD TRIM31 TRIM31-AS1 ENSG00000224486 HLA-N
GH06H030346 0.5 ENCODE 0.4 -5.0 -5012 0.1 TCF12 NCOR1 SMARCA4 RPP21 HLA-N
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HLA-N on UCSC Golden Path with GeneCards custom track

Genomic Locations for HLA-N Gene

Genomic Locations for HLA-N Gene
chr6:30,351,074-30,352,038
(GRCh38/hg38)
Size:
965 bases
Orientation:
Plus strand
chr6:30,318,851-30,319,815
(GRCh37/hg19)

Genomic View for HLA-N Gene

Genes around HLA-N on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-N Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-N Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-N Gene

Post-translational modifications for HLA-N Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-N Gene

Domains & Families for HLA-N Gene

Gene Families for HLA-N Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-N: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-N Gene

Function for HLA-N Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-N Gene

Localization for HLA-N Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-N Gene

Pathways & Interactions for HLA-N Gene

SuperPathways for HLA-N Gene

No Data Available

Interacting Proteins for HLA-N Gene

Gene Ontology (GO) - Biological Process for HLA-N Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-N Gene

Drugs & Compounds for HLA-N Gene

No Compound Related Data Available

Transcripts for HLA-N Gene

mRNA/cDNA for HLA-N Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-N Gene

No ASD Table

Relevant External Links for HLA-N Gene

GeneLoc Exon Structure for
HLA-N
ECgene alternative splicing isoforms for
HLA-N

Expression for HLA-N Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HLA-N Gene

genes like me logo Genes that share expression patterns with HLA-N: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-N Gene

Orthologs for HLA-N Gene

Evolution for HLA-N Gene

ENSEMBL:
Gene Tree for HLA-N (if available)
TreeFam:
Gene Tree for HLA-N (if available)

No data available for Orthologs for HLA-N Gene

Paralogs for HLA-N Gene

No data available for Paralogs for HLA-N Gene

Variants for HLA-N Gene

Relevant External Links for HLA-N Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-N

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-N Gene

Disorders for HLA-N Gene

Relevant External Links for HLA-N

Genetic Association Database (GAD)
HLA-N

No disorders were found for HLA-N Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-N Gene

Publications for HLA-N Gene

  1. Gene organisation, sequence variation and isochore structure at the centromeric boundary of the human MHC. (PMID: 10452889) Stephens R … Beck S (Journal of molecular biology 1999) 2 3 60
  2. The HLA class I gene family includes at least six genes and twelve pseudogenes and gene fragments. (PMID: 1517563) Geraghty DE … Orr HT (Journal of immunology (Baltimore, Md. : 1950) 1992) 2 3 60
  3. Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX. (PMID: 18204098) Hom G … Behrens TW (The New England journal of medicine 2008) 45 60

Products for HLA-N Gene

Sources for HLA-N Gene

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