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Aliases for HLA-L Gene

Aliases for HLA-L Gene

  • Major Histocompatibility Complex, Class I, L (Pseudogene) 2 3 5
  • HLA-92 3
  • HLA92 3
  • HLAL 3

External Ids for HLA-L Gene

Previous HGNC Symbols for HLA-L Gene

  • HLA92
  • HLAL

Previous GeneCards Identifiers for HLA-L Gene

  • GC06U990059
  • GC06P030332
  • GC06P030334
  • GC06P030226
  • GC06P030370
  • GC06P030316
  • GC06P030417

Summaries for HLA-L Gene

GeneCards Summary for HLA-L Gene

HLA-L (Major Histocompatibility Complex, Class I, L (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-L Gene

Genomics for HLA-L Gene

Regulatory Elements for HLA-L Gene

Enhancers for HLA-L Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around HLA-L on UCSC Golden Path with GeneCards custom track

Promoters for HLA-L Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around HLA-L on UCSC Golden Path with GeneCards custom track

Genomic Location for HLA-L Gene

30,259,562 bp from pter
30,293,014 bp from pter
33,453 bases
Plus strand

Genomic View for HLA-L Gene

Genes around HLA-L on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-L Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for HLA-L Gene

Post-translational modifications for HLA-L Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-L Gene

Domains & Families for HLA-L Gene

Gene Families for HLA-L Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-L: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-L Gene

Function for HLA-L Gene

Molecular function for HLA-L Gene

GENATLAS Biochemistry:
HLA class I-like gene L,9.2 Hind III fragment,see MHC1

Phenotypes for HLA-L Gene

genes like me logo Genes that share phenotypes with HLA-L: view

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-L Gene

Localization for HLA-L Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HLA-L Gene

Pathways & Interactions for HLA-L Gene

SuperPathways for HLA-L Gene

No Data Available

Interacting Proteins for HLA-L Gene

Gene Ontology (GO) - Biological Process for HLA-L Gene


No data available for Pathways by source and SIGNOR curated interactions for HLA-L Gene

Drugs & Compounds for HLA-L Gene

No Compound Related Data Available

Transcripts for HLA-L Gene

mRNA/cDNA for HLA-L Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-L Gene

No ASD Table

Relevant External Links for HLA-L Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HLA-L Gene

mRNA expression in normal human tissues for HLA-L Gene

genes like me logo Genes that share expression patterns with HLA-L: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for HLA-L Gene

Orthologs for HLA-L Gene

Evolution for HLA-L Gene

Gene Tree for HLA-L (if available)
Gene Tree for HLA-L (if available)

No data available for Orthologs for HLA-L Gene

Paralogs for HLA-L Gene

No data available for Paralogs for HLA-L Gene

Variants for HLA-L Gene

Sequence variations from dbSNP and Humsavar for HLA-L Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs116618167 -- 30,258,068(+) CACCA(A/C/T)GAAAA upstream-variant-2KB
rs375621369 -- 30,261,905(+) TGATT(G/T)TGGTG intron-variant
rs747994212 -- 30,261,162(+) CCTAT(A/G)AGGAA intron-variant
rs767036276 -- 30,262,277(+) TTCCT(A/G)TTTTT intron-variant
rs779352946 -- 30,258,182(+) TAACA(C/T)ATAAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for HLA-L Gene

Variant ID Type Subtype PubMed ID
esv2731777 CNV Deletion 23290073
esv2731782 CNV Deletion 23290073
esv2731783 CNV Deletion 23290073
esv2731785 CNV Deletion 23290073
esv2731786 CNV Deletion 23290073
nsv884061 CNV Loss 21882294

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for HLA-L Gene

Disorders for HLA-L Gene

Relevant External Links for HLA-L

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for HLA-L Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-L Gene

Publications for HLA-L Gene

  1. High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions. (PMID: 19851445) Barcellos L.F. … Criswell L.A. (PLoS Genet. 2009) 3 48 67
  2. Examination of four HLA class I pseudogenes. Common events in the evolution of HLA genes and pseudogenes. (PMID: 1517564) Geraghty D.E. … Hansen J.A. (J. Immunol. 1992) 2 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3

Products for HLA-L Gene

Sources for HLA-L Gene