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Aliases for HLA-L Gene

Aliases for HLA-L Gene

  • Major Histocompatibility Complex, Class I, L (Pseudogene) 2 3
  • HLA-92 3
  • HLA92 3
  • HLAL 3

External Ids for HLA-L Gene

Previous Symbols for HLA-L Gene

  • HLA92
  • HLAL

Summaries for HLA-L Gene

GeneCards Summary for HLA-L Gene

HLA-L (Major Histocompatibility Complex, Class I, L (Pseudogene)) is a Pseudogene. Diseases associated with HLA-L include systemic lupus erythematosus.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-L Gene

Genomics for HLA-L Gene

Genomic Location for HLA-L Gene

Start:
30,259,562 bp from pter
End:
30,293,014 bp from pter
Size:
33,453 bases
Orientation:
Plus strand

Genomic View for HLA-L Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HLA-L Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Regulatory Elements for HLA-L Gene

Proteins for HLA-L Gene

Post-translational modifications for HLA-L Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-L Gene

Domains for HLA-L Gene

Gene Families for HLA-L Gene

HGNC:
  • HLA :Histocompatibility complex
genes like me logo Genes that share domains with HLA-L: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for HLA-L Gene

Function for HLA-L Gene

Molecular function for HLA-L Gene

GENATLAS Biochemistry: HLA class I-like gene L,9.2 Hind III fragment,see MHC1

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HLA-L Gene

Localization for HLA-L Gene

No data available for Gene Ontology (GO) - Cellular Components for HLA-L Gene

Pathways for HLA-L Gene

SuperPathways for HLA-L Gene

No Data Available

Interacting Proteins for HLA-L Gene

Gene Ontology (GO) - Biological Process for HLA-L Gene

None

No data available for Pathways by source for HLA-L Gene

Transcripts for HLA-L Gene

mRNA/cDNA for HLA-L Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-L Gene

No ASD Table

Relevant External Links for HLA-L Gene

GeneLoc Exon Structure for
HLA-L
ECgene alternative splicing isoforms for
HLA-L

Expression for HLA-L Gene

mRNA expression in normal human tissues for HLA-L Gene

genes like me logo Genes that share expressions with HLA-L: view

Orthologs for HLA-L Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for HLA-L Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Gm7030 16
Species with no ortholog for HLA-L:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for HLA-L Gene

ENSEMBL:
Gene Tree for HLA-L (if available)
TreeFam:
Gene Tree for HLA-L (if available)

Paralogs for HLA-L Gene

No data available for Paralogs for HLA-L Gene

Variants for HLA-L Gene

Structural Variations from Database of Genomic Variants (DGV) for HLA-L Gene

Variant ID Type Subtype PubMed ID
esv2731777 CNV Deletion 23290073
esv2731782 CNV Deletion 23290073
esv2731783 CNV Deletion 23290073
esv2731785 CNV Deletion 23290073
esv2731786 CNV Deletion 23290073
nsv884061 CNV Loss 21882294

Relevant External Links for HLA-L Gene

HapMap Linkage Disequilibrium report
HLA-L
Locus Specific Mutation Databases (LSDB)
HLA-L

No data available for Sequence variations from dbSNP and Humsavar for HLA-L Gene

Disorders for HLA-L Gene

Relevant External Links for HLA-L

Genetic Association Database (GAD)
HLA-L
Human Genome Epidemiology (HuGE) Navigator
HLA-L
genes like me logo Genes that share disorders with HLA-L: view

No data available for UniProtKB/Swiss-Prot for HLA-L Gene

Publications for HLA-L Gene

  1. Examination of four HLA class I pseudogenes. Common events in the evolution of HLA genes and pseudogenes. (PMID: 1517564) Geraghty D.E. … Hansen J.A. (J. Immunol. 1992) 2 3
  2. High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions. (PMID: 19851445) Barcellos L.F. … Criswell L.A. (PLoS Genet. 2009) 3 49
  3. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for HLA-L Gene

Sources for HLA-L Gene

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