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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

HLA-G Gene

protein-coding   GIFtS: 65
GCID: GC06P029794

major histocompatibility complex, class I, G

(Previous names: HLA-G histocompatibility antigen, class I, G )
 Explore 127 diseases affiliated with
HLA-G via our new
 Human Malady Compendium 
Biological research products
for HLA-G
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Major Histocompatibility Complex, Class I, G1 2     B2 Microglobulin2
HLA-G Histocompatibility Antigen, Class I, G1 2     HLA Class I Histocompatibility Antigen, Alpha Chain G2
HLA G Antigen2 3     HLA Class I Molecule2
MHC Class I Antigen G2 3     HLA-6.03
MHC-G2     HLAG3

External Ids:    HGNC: 49641   Entrez Gene: 31352   Ensembl: ENSG000002046327   OMIM: 1428715   UniProtKB: P176933   

Export aliases for HLA-G gene to outside databases

Previous GC identifers: GC06P029852 GC06P029565 GC06P029904 GC06P029906 GC06P029907 GC06P029913 GC06P029598


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for HLA-G:
HLA-G belongs to the HLA class I heavy chain paralogues. This class I molecule is a heterodimer consisting of a heavy
chain and a light chain (beta-2 microglobulin). The heavy chain is anchored in the membrane. HLA-G is expressed on
fetal derived placental cells. The heavy chain is approximately 45 kDa and its gene contains 8 exons. Exon one encodes
the leader peptide, exons 2 and 3 encode the alpha1 and alpha2 domain, which both bind the peptide, exon 4 encodes the
alpha3 domain, exon 5 encodes the transmembrane region, and exon 6 encodes the cytoplasmic tail. (provided by RefSeq,
Jul 2008)

UniProtKB/Swiss-Prot: HLAG_HUMAN, P17693
Function: Involved in the presentation of foreign antigens to the immune system. Plays a role in maternal tolerance of
the fetus by mediating protection from the deleterious effects of natural killer cells, cytotoxic T-lymphocytes,
macrophages and mononuclear cells

Gene Wiki entry for HLA-G


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000006.11  NC_018917.1  NT_007592.15  NT_113891.2  NT_167245.1  NT_167246.1  NT_167247.1  NT_167248.1  
NT_167249.1  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the HLA-G gene promoter:
         AP-1   RREB-1   ATF-2   p300   IRF-1   AP-2gamma   CREB   deltaCREB   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidHLA-G promoter sequence
   Search SABiosciences Chromatin IP Primers for HLA-G

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat HLA-G


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 6p21.3   Ensembl cytogenetic band:  6p22.1   HGNC cytogenetic band: 6p21.3

HLA-G Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
HLA-G gene location

GeneLoc information about chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06P029794:  view genomic region     (about GC identifiers)

Start:
29,794,744 bp from pter      End:
29,798,902 bp from pter
Size:
4,159 bases      Orientation:
plus strand

6 alternative locations:
Chr6+,ALT_REF_LOCI_2 29,788,431-29,831,788      Chr6+,ALT_REF_LOCI_4 29,714,745-29,718,887      Chr6+,ALT_REF_LOCI_6 29,791,932-29,831,682     
Chr6+,ALT_REF_LOCI_5 29,706,458-29,710,601      Chr6+,ALT_REF_LOCI_3 29,791,968-29,807,161      Chr6+,ALT_REF_LOCI_7 29,721,773-29,725,930     

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: HLAG_HUMAN, P17693 (See protein sequence)
Recommended Name: HLA class I histocompatibility antigen, alpha chain G precursor  
Size: 338 amino acids; 38224 Da
Subunit: Heterodimer of an alpha chain and a beta chain (beta-2-microglobulin). Homodimer; disulfide-linked. Binds to
LILRB1 and LILRB2
Subcellular location: Membrane; Single-pass type I membrane protein
6/8 PDB 3D structures from and Proteopedia for HLA-G (see all 8):
1YDP (3D)        2D31 (3D)        2DYP (3D)        3BZE (3D)        3CDG (3D)        3CII (3D)    

Explore the universe of human proteins at neXtProt for HLA-G: NX_P17693

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P17693

  • HLA-G Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_002118.1  
    ENSEMBL proteins: 
     ENSP00000366024   ENSP00000353472   ENSP00000366014   ENSP00000436375   ENSP00000366011  
     ENSP00000412927  
    Reactome Protein details: P17693
    Human Recombinant Protein Products: 
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    Uscn Proteins for HLA-G

    Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000139Golgi membrane TAS--
    GO:0005886plasma membrane TAS--
    GO:0012507ER to Golgi transport vesicle membrane TAS--
    GO:0030670phagocytic vesicle membrane TAS--
    GO:0031901early endosome membrane TAS--


    HLA-G for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for HLA-G


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    HLA-G for domains           About GeneDecksing

    5/7 InterPro domains/families (see all 7):
     IPR011162 MHC_I/II-like_Ag-recog
     IPR013783 Ig-like_fold
     IPR003597 Ig_C1-set
     IPR007110 Ig-like_dom
     IPR003006 Ig/MHC_CS

    Graphical View of Domain Structure for InterPro Entry P17693

    ProtoNet protein and cluster: P17693

    2 Blocks protein families:
    IPB001039 MHC class I signature
    IPB003597 Immunoglobulin C-type


    UniProtKB/Swiss-Prot: HLAG_HUMAN, P17693
    Similarity: Belongs to the MHC class I family
    Similarity: Contains 1 Ig-like C1-type (immunoglobulin-like) domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: HLAG_HUMAN, P17693
    Function: Involved in the presentation of foreign antigens to the immune system. Plays a role in maternal tolerance of
    the fetus by mediating protection from the deleterious effects of natural killer cells, cytotoxic T-lymphocytes,
    macrophages and mononuclear cells

         Genatlas biochemistry entry for HLA-G:
    HLA class Ib ,6.0kb Hind III fragment,expressed in trophoblast (see MHC1),including a 5' locus control region (see LCR-
    HLA-G)

    miRNA
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    miRTarBase miRNAs that target HLA-G:
    hsa-mir-152 (MIRT000293), hsa-mir-148b (MIRT000295), hsa-mir-148a (MIRT000297)

    OriGene 3'-UTR Clone: HLA-G
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    Inhib. RNA
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    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005102receptor binding IPI--
    GO:0032393MHC class I receptor activity TAS9539768
    GO:0042803protein homodimerization activity NAS18550825


    HLA-G for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for HLA-G:
     Decreased BPV1 E2 protein expr  Increased HPV18 LCR reporter a 

    Animal Models:
         Mouse knock-out H2-M3H2-tm1Crw for HLA-G
         3 MGI mutant phenotypes (inferred from 1 allele(MGI details for H2-M3):
     hematopoietic system  homeostasis/metabolism  immune system 

    HLA-G for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/15 super-pathways (see all 15About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Translocation of peptide bound MHC class I complex to cell surface
    Translocation of peptide bound MHC class I complex to cell surface1.00
    Endosomal/Vacuolar pathway0.78
    Journey of cargo through Golgi complex1.00
    Peptide loading on MHC class I in phagosome0.70
    Expression of peptide bound class I MHC on cell surface1.00
    Antigen Presentation: Folding, assembly and peptide loading of class I MHC0.28
    Export of peptide loaded MHC class I complex to PM1.00
    2Allograft rejection
    Allograft rejection1.00
    CTL Mediated Apoptosis0.38
    Type I diabetes mellitus0.67
    Viral myocarditis0.33
    Graft-versus-host disease0.63
    Antigen processing and presentation0.25
    Autoimmune thyroid disease0.60
    3Ubiquitinated Orc1 is degraded by the proteasome
    ER-Phagosome pathway0.74
    Proteasome Degradation0.56
    Antigen processing-Cross presentation0.60
    4Cytokine Signaling in Immune system
    Cytokine Signaling in Immune system1.00
    Interferon Signaling0.61
    5Immune System
    Immune System1.00
    Adaptive Immune System0.59

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for HLA-G
        Immune response Role of DAP12 receptors in NK cells

    2 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for HLA-G
        CDC42 Pathway
    CTL Mediated Apoptosis

    1 GeneGo (Thomson Reuters) Pathway for HLA-G
        Immune response Role of DAP12 receptors in NK cells

    1 BioSystems Pathway for HLA-G 
        Proteasome Degradation

    5/19        Reactome Pathways for HLA-G (see all 19)
        Endosomal/Vacuolar pathway
    Antigen Presentation: Folding, assembly and peptide loading of class I MHC
    Interferon alpha/beta signaling
    Expression of IFN-induced genes
    ER-Phagosome pathway


    5/10         Kegg Pathways  (Kegg details for HLA-G) (see all 10):
        Endocytosis
    Phagosome
    Cell adhesion molecules (CAMs)
    Antigen processing and presentation
    Natural killer cell mediated cytotoxicity


    HLA-G for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for HLA-G

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/55 Interacting proteins for HLA-G (P176932, 3 ENSP000003534724) via UniProtKB, MINT, STRING, and/or I2D (see all 55)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    LILRB1Q8NHL62, 3, ENSP000003159974MINT-7144982 I2D: score=3 STRING: ENSP00000315997
    ENSG00000206505P304573, ENSP000003731144I2D: score=1 STRING: ENSP00000373114
    HLA-AP304573, ENSP000003660054I2D: score=1 STRING: ENSP00000366005
    B2MP617693, ENSP000003408584I2D: score=3 STRING: ENSP00000340858
    CD8AP017323, ENSP000002836354I2D: score=3 STRING: ENSP00000283635
    About this table

    Gene Ontology (GO): 5/17 biological process terms (GO ID links to tree view) (see all 17):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0002474antigen processing and presentation of peptide antigen via MHC class I TAS--
    GO:0002479antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent TAS--
    GO:0002480antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent TAS--
    GO:0002666positive regulation of T cell tolerance induction IMP--
    GO:0002767immune response-inhibiting cell surface receptor signaling pathway IDA--


    HLA-G for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    HLA-G for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for HLA-G
    10/27 Novoseek chemical compound relationships for HLA-G gene (see all 27)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    1-methyltryptophan 46.5 1 16236119 (1)
    indoleamine 35 6 15878889 (2), 18289708 (2), 19143868 (1), 16129951 (1)
    5-aza-2'deoxycytidine 32.3 32 16045815 (4), 18823661 (3), 18498645 (2), 12552087 (1)
    neopterin 12.7 5 2129033 (2), 2117484 (1), 1878399 (1)
    matrigel 12.5 2 10684818 (2)
    ifn-alpha 12.5 1 12183445 (1)
    progesterone 7.59 23 19527229 (4), 16210391 (4), 20052552 (2), 18824770 (2) (see all 9)
    sodium 4.47 1 12545635 (1)
    oxygen 2.05 4 18325889 (1), 16807282 (1)
    cholesterol 0.747 1 8079411 (1)

    1 PharmGKB related drug/compound annotation for HLA-G gene
    Drug/compound PharmGKB Annotation
    methotrexateCA  
    About this table

    Search CenterWatch for drugs/clinical trials and news about HLA-G / HLAG 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for HLA-G gene: 
    NM_002127.5  

    Unigene Cluster for HLA-G:

    Major histocompatibility complex, class I, G
    Hs.512152  [show with all ESTs]
    Unigene Representative Sequence: AK093478
    7 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000376828(uc003raj.3) ENST00000360323(uc003nnz.3 uc010jrn.2 uc011dmb.2)
    ENST00000478355 ENST00000376818 ENST00000478519(uc003nny.3) ENST00000376815(uc003ran.1)
    ENST00000428701(uc003nnw.2)

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    Additional cDNA sequence: 

    AF071017.1 AF071018.1 AF071019.1 AF071020.1 AF071021.1 AF071022.1 AF196177.1 AF196178.1 
    AF226990.2 AF436089.1 AK093478.1 AK302054.1 AY359818.1 BC021708.2 M32800.1 M90683.1 
    M90684.1 M90685.1 M90686.1 U58024.1 U58025.1 U58026.1 U58027.1 U58028.1 
    U58029.1 U58094.1 U88244.1 X17273.1 

    17 DOTS entries:

    DT.100753459  DT.100825997  DT.455506  DT.95158992  DT.100645441  DT.100753462  DT.100809966  DT.100733427 
    DT.100733440  DT.100855576  DT.100733391  DT.100859573  DT.121345649  DT.315161  DT.91722926  DT.91783937 
    DT.95338475 

    24/25 AceView cDNA sequences (see all 25):

    CR608458 CR613246 AF071021 M90684 AF226990 M90683 CR623340 CR606159 
    AF196177 AF071018 X17273 AF196178 AF071020 M90686 AF071017 AF071019 
    AX748153 M32800 AK093478 U88244 BC021708 M90685 AY359818 AF071022 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    HLA-G expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: --

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    HLA-G expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    Umbilical CordWharton's JellyUmbilical Cord Mesenchymal Stem CellsExtraembryonic Tissues, Umbilical Cord
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 4 LifeMap Cells 
    NameCategory
    Bone marrow-derived adherent progenitor cells (MultiStem) (Adult Stem / Progenitor Cell)Bone
    PureStem™ progenitor E69 (Embryonic Progenitor Cell)
    Trophoblast-like cells (Generation of tropho...)
    Syncytiotrophoblast-like cells (Generation of syncyt...)

    See HLA-G Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for HLA-G

    SOURCE GeneReport for Unigene cluster: Hs.512152

    UniProtKB/Swiss-Prot: HLAG_HUMAN, P17693
    Tissue specificity: Expressed in trophoblasts

        SABiosciences Expression via Pathway-Focused PCR Array including HLA-G: 
              Type I Interferon Response in human mouse rat

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    In Situ
    Assay Products:
     

     
    Search Advanced Cell Diagnostics for RNAscope RNA in situ hybridization assays for HLA-G

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for HLA-G gene from 3/8 species (see all 8)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves F1NM79_CHICK6
    --
    (see all 15)
    --
    41(a)
    38(a)
    (see all 15)
    many ↔ many
    many ↔ many
    (see all 15)
    16(40458-41204)
    Un(62829135-62830402)
    lizard
    (Anolis carolinensis)
    Reptilia --
    --
    (see all 25)
    --
    46(a)
    46(a)
    (see all 25)
    many ↔ many
    many ↔ many
    (see all 25)
    AAWZ02040156(3915-5955)
    AAWZ02038573(7605-9645)
    zebrafish
    (Danio rerio)
    Actinopterygii si:ch211-287j19.66
    CABZ01089980.16
    (see all 7)
    --
    26(a)
    25(a)
    (see all 7)
    many ↔ many
    many ↔ many
    (see all 7)
    1(47613228-47619236)
    3(502131-512626)


    ENSEMBL Gene Tree for HLA-G (if available)
    TreeFam Gene Tree for HLA-G (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for HLA-G gene
    HLA-F2  MR12  HFE2  HLA-B2  FCGRT2  HLA-E2  HLA-C2  HLA-A2  
    18/114 SIMAP similar genes for HLA-G using alignment to 96 protein entries:     HLAG_HUMAN (see all proteins) (see all similar genes):
    HLA G locus    MHC-G    HLA-G3    HLA-ABC    HLA-A*0201V3    HLA-Cw3
    HLA-A24AK    HLA-A*24    Cw*08    HLAC    MHC    HLA-A*33
    DKFZp686P19218    HLA-A*2410    Cw*03    HLA-B*4202    HLA-Cw*07    HLA-Cw*0707

    HLA-G for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/256 NCBI SNPs in HLA-G are shown (see all 256    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 6 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs12333361,2
    F,--29596236(-) ccaggT/Ggtggt 1 -- us2k12Minor allele frequency- G:0.05WA NA 238
    rs94615631,2
    --29596800(+) gaaacC/Tgcatt 1 -- us2k10--------
    rs12333351,2
    F,--29596921(-) TTGTTG/CTTTAT 1 -- us2k1 tfbs32Minor allele frequency- C:0.05WA NA 238
    rs16329491,2
    C,F,A,H,--29597064(-) ttaaaA/Gagaaa 1 -- us2k122Minor allele frequency- G:0.34NS EA NA WA CSA 2332
    rs17369371,2
    C,F,A,H,--29597216(-) TTAGAG/TACAGA 1 -- us2k1 tfbs311Minor allele frequency- T:0.29NA WA CSA EA 374
    rs561282941,2
    C--29597507(+) TGCTCA/GAGTGC 1 -- us2k10--------
    rs1130764821,2
    --29597585(+) CACTCT/GGACTC 1 -- us2k12Minor allele frequency- G:0.02CSA WA 120
    rs1128355401,2
    C,--29597652(+) TAGAGC/TCACAG 1 -- us2k11Minor allele frequency- T:0.50NA 2
    rs178753921,2
    F--29598417(+) GGGGG-/GAAAAA 1 -- int1 trp31Minor allele frequency- G:0.06MN 66
    rs1129409531,2
    --29598423(+) GGGGAG/AAAAAA 1 -- int11Minor allele frequency- A:0.50CSA 2

    HapMap Linkage Disequilibrium report for HLA-G (29794744 - 29798902 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 3 variations for HLA-G
         3 CNVs: 64462 64460 3599
    Human Gene Mutation Database (HGMD): HLA-G

    Locus Specific Mutation Databases (LSDB): HLA-G

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing HLA-G
    DNA2.0 Custom Variant and Variant Library Synthesis for HLA-G

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    HLA-G for disorders           About GeneDecksing

    OMIM gene information: 142871   
    OMIM disorders: 600807  
    20/127 diseases for HLA-G (see all 127):    About MalaCards
    severe pre-eclampsia    monoclonal gammopathy of undetermined significance    pre-eclampsia    relapsing-remitting multiple sclerosis
    soft tissue sarcoma    pemphigus vulgaris    patent ductus arteriosus    indolent b cell lymphoma
    graft versus host disease    b-cell lymphomas    lipid metabolism disorder    placental abruption
    intrahepatic cholestasis    ectopic pregnancy    non-hodgkin lymphoma    cervical intraepithelial neoplasia
    intrahepatic cholestasis of pregnancy    inflammatory bowel disease    bladder transitional cell carcinoma    polycythemia vera

    2 diseases from the University of Copenhagen DISEASES database for HLA-G:
    pre-eclampsia     Choriocarcinoma

    10/89 Novoseek disease relationships for HLA-G gene (see all 89)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    choriocarcinoma 75.1 39 16202295 (5), 17949227 (2), 19145204 (2), 15209386 (2) (see all 23)
    miscarriage 67.1 46 20228379 (3), 9333005 (3), 16426245 (2), 12392506 (2) (see all 24)
    tumor escape 66.5 10 15814900 (2), 12552087 (1), 16911982 (1), 17072500 (1) (see all 8)
    miscarriage recurrent 65.4 16 16514201 (4), 11925408 (2), 18480096 (2), 10102087 (2) (see all 9)
    preeclampsia 63.7 91 14985477 (6), 12797524 (5), 7547760 (4), 11766889 (4) (see all 35)
    pregnancy disorder 54.1 3 16867913 (1), 17026466 (1)
    pediatric soft tissue sarcoma 49.2 3 19693535 (2), 20033427 (1)
    pregnancy loss 44.3 8 17629722 (1), 19127811 (1), 12900514 (1), 19527228 (1)
    lymphocytic leukemia chronic b-cell 43.2 9 18241213 (2), 19298722 (2), 18499249 (1), 15466928 (1) (see all 6)
    severe pre-eclampsia 40.3 4 19811467 (2), 10611266 (1), 20070604 (1)

    Genetic Association Database (GAD): HLA-G
    Human Genome Epidemiology (HuGE) Navigator: HLA-G (2822 documents)

    Export disorders for HLA-G gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for HLA-G gene, integrated from 9 sources (see all 814):
    (articles sorted by number of sources associating them with HLA-G)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. HLA-G and IL-10 in serum in relation to HLA-G genotype and polymorphisms. (PubMed id 15133645)1, 4, 9 Hviid T.V....Baricordi O.R. (2004)
    2. HLA-G polymorphisms in couples with recurrent spontaneous abortions. (PubMed id 12392506)1, 4, 9 Hviid T.V....Christiansen O.B. (2002)
    3. Disulfide bond-mediated dimerization of HLA-G on the cell surface. (PubMed id 12454284)1, 2, 9 Boyson J.E.... Strominger J.L. (2002)
    4. Association of soluble HLA-G plasma levels with HLA-G alleles. (PubMed id 11169254)1, 4, 9 Rebmann V....Grosse-Wilde H. (2001)
    5. Altered HLA-G transcription in pre-eclampsia is associated with allele specific inheritance: possible role of the HLA-G gene in susceptibility to the disease. (PubMed id 11766889)1, 4, 9 O'Brien M....Moreau P. (2001)
    6. HLA-G and HLA-E polymorphisms in an indigenous African population. The ZVITAMBO Study Group. (PubMed id 11137220)1, 4, 9 Matte C....Roger M. (2000)
    7. Genetic variants in nonclassical major histocompatibility complex class I human leukocyte antigen (HLA)-E and HLA-G molecules are associated with susceptibility to heterosexual acquisition of HIV-1. (PubMed id 16362895)1, 4, 9 Lajoie J....Roger M. (2006)
    8. Efficient leukocyte Ig-like receptor signaling and crystal structure of disulfide-linked HLA-G dimer. (PubMed id 16455647)1, 2, 9 Shiroishi M.... Maenaka K. (2006)
    9. Association between human leukocyte antigen-G genotype and success of in vitro fertilization and pregnancy outcome. (PubMed id 15191524)1, 4, 9 Hviid T.V....Christiansen O.B. (2004)
    10. Analysis of human leukocyte antigen (HLA)-G polymorphism in normal women and in women with recurrent spontaneous abortions. (PubMed id 15548266)1, 4, 9 Abbas A....Agrawal S. (2004)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 3135 HGNC: 4964 AceView: HLA-G Ensembl:ENSG00000204632 euGenes: HUgn3135
    ECgene: HLA-G Kegg: 3135 H-InvDB: HLA-G

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for HLA-G Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for HLA-G gene:
    Search GeneIP for patents involving HLA-G

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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