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Aliases for HLA-DRB9 Gene

Aliases for HLA-DRB9 Gene

  • Major Histocompatibility Complex, Class II, DR Beta 9 (Pseudogene) 2 3 5
  • MHC Class II Antigen 3
  • HLA-DR1BL 3
  • HLA-DRB1L 3
  • D6S206E 3
  • D6S206 3

External Ids for HLA-DRB9 Gene

Previous HGNC Symbols for HLA-DRB9 Gene

  • HLA-DRB1L
  • HLA-DR1BL

Previous GeneCards Identifiers for HLA-DRB9 Gene

  • GC06M032454
  • GC06M032198
  • GC06M032498
  • GC06M032535

Summaries for HLA-DRB9 Gene

GeneCards Summary for HLA-DRB9 Gene

HLA-DRB9 (Major Histocompatibility Complex, Class II, DR Beta 9 (Pseudogene)) is a Pseudogene.

Additional gene information for HLA-DRB9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-DRB9 Gene

Genomics for HLA-DRB9 Gene

GeneHancer (GH) Regulatory Elements for HLA-DRB9 Gene

Promoters and enhancers for HLA-DRB9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I032472 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 550.8 0.0 -7 3 HDGF ATF1 SMAD1 BACH1 CEBPG RFX5 RFXANK POLR2A ZNF143 FOS HLA-DRB9 HLA-DQA2 HLA-DRB6 HLA-DRB1 C4A HLA-DRB5 HLA-DQA1 HLA-DQB1-AS1 HLA-DQB1 GC06M032486
GH06I032459 Enhancer 0.9 FANTOM5 Ensembl 0.4 +13.5 13528 0.7 HCFC1 DPF2 KLF4 ZBTB40 GABPA ZFHX2 IKZF1 NBN ZNF444 IKZF2 GC06P032458 HLA-DQA2 HLA-DRB6 HLA-DQB1 MICB HLA-DRB5 HLA-DRB1 PRRT1 HLA-DRB9
GH06I032462 Enhancer 0.9 FANTOM5 0.4 +10.6 10617 0.2 SIX4 PKNOX1 BACH1 ZNF76 EBF1 BATF IRF4 ZFHX2 ZSCAN5C ZNF143 HLA-DRB5 HLA-DRA HLA-DMA STK19 PSMB8 HLA-DMB HLA-DQB1 HLA-DRB1 GC06P032458 HLA-DRB9
GH06I032481 Enhancer 0.3 dbSUPER 0.4 -9.7 -9661 2.8 ATF4 HLA-DRB6 HLA-DQA2 HLA-DRB5 HLA-DQA1 C4A MICB GC06M032486 HLA-DRB9
GH06I032479 Enhancer 0.2 dbSUPER 0.4 -7.2 -7203 1.9 HLA-DRB6 HLA-DQA2 HLA-DRB1 HLA-DRB5 HLA-DQA1 MICB HLA-DQB1 CYP21A1P GC06M032486 HLA-DRB9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HLA-DRB9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HLA-DRB9 Gene

Genomic Locations for HLA-DRB9 Gene
chr6:32,459,820-32,473,500
(GRCh38/hg38)
Size:
13,681 bases
Orientation:
Minus strand
chr6:32,427,597-32,441,277
(GRCh37/hg19)

Genomic View for HLA-DRB9 Gene

Genes around HLA-DRB9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-DRB9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-DRB9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HLA-DRB9 Gene

Proteins for HLA-DRB9 Gene

  • Protein details for HLA-DRB9 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D7GNM9
    Recommended name:
    MHC class II antigen
    Protein Accession:
    D7GNM9

    Protein attributes for HLA-DRB9 Gene

    Size:
    89 amino acids
    Molecular mass:
    10503 Da
    Quaternary structure:
    No Data Available
  • Protein details for HLA-DRB9 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D7GNN0
    Recommended name:
    MHC class II antigen
    Protein Accession:
    D7GNN0

    Protein attributes for HLA-DRB9 Gene

    Size:
    89 amino acids
    Molecular mass:
    10489 Da
    Quaternary structure:
    No Data Available
  • Protein details for HLA-DRB9 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D7GNN1
    Recommended name:
    MHC class II antigen
    Protein Accession:
    D7GNN1

    Protein attributes for HLA-DRB9 Gene

    Size:
    89 amino acids
    Molecular mass:
    10480 Da
    Quaternary structure:
    No Data Available

neXtProt entry for HLA-DRB9 Gene

Post-translational modifications for HLA-DRB9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-DRB9 Gene

Domains & Families for HLA-DRB9 Gene

Gene Families for HLA-DRB9 Gene

Protein Domains for HLA-DRB9 Gene

Suggested Antigen Peptide Sequences for HLA-DRB9 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-DRB9: view

No data available for UniProtKB/Swiss-Prot for HLA-DRB9 Gene

Function for HLA-DRB9 Gene

Molecular function for HLA-DRB9 Gene

GENATLAS Biochemistry:
HLA-DR,beta 9 pseudogene,isolated fragment

Phenotypes From GWAS Catalog for HLA-DRB9 Gene

Phenotypes for HLA-DRB9 Gene

GenomeRNAi human phenotypes for HLA-DRB9:
genes like me logo Genes that share phenotypes with HLA-DRB9: view

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-DRB9 Gene

Localization for HLA-DRB9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HLA-DRB9 Gene

Pathways & Interactions for HLA-DRB9 Gene

SuperPathways for HLA-DRB9 Gene

No Data Available

Interacting Proteins for HLA-DRB9 Gene

Gene Ontology (GO) - Biological Process for HLA-DRB9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-DRB9 Gene

Drugs & Compounds for HLA-DRB9 Gene

No Compound Related Data Available

Transcripts for HLA-DRB9 Gene

mRNA/cDNA for HLA-DRB9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-DRB9 Gene

No ASD Table

Relevant External Links for HLA-DRB9 Gene

GeneLoc Exon Structure for
HLA-DRB9
ECgene alternative splicing isoforms for
HLA-DRB9

Expression for HLA-DRB9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HLA-DRB9 Gene

genes like me logo Genes that share expression patterns with HLA-DRB9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-DRB9 Gene

Orthologs for HLA-DRB9 Gene

Evolution for HLA-DRB9 Gene

ENSEMBL:
Gene Tree for HLA-DRB9 (if available)
TreeFam:
Gene Tree for HLA-DRB9 (if available)

No data available for Orthologs for HLA-DRB9 Gene

Paralogs for HLA-DRB9 Gene

genes like me logo Genes that share paralogs with HLA-DRB9: view

No data available for Paralogs for HLA-DRB9 Gene

Variants for HLA-DRB9 Gene

Additional Variant Information for HLA-DRB9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-DRB9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-DRB9 Gene

Disorders for HLA-DRB9 Gene

Additional Disease Information for HLA-DRB9

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)

No disorders were found for HLA-DRB9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-DRB9 Gene

Publications for HLA-DRB9 Gene

  1. Genome-wide association study for ulcerative colitis identifies risk loci at 7q22 and 22q13 (IL17REL). (PMID: 20228798) Franke A … Schreiber S (Nature genetics 2010) 3 44 58
  2. Nomenclature for factors of the HLA system, 1991. WHO Nomenclature Committee for factors of the HLA system. (PMID: 1529427) Bodmer JG … Sasazuki T (Tissue antigens 1992) 2 3 58
  3. Genome-wide association analysis identifies 13 new risk loci for schizophrenia. (PMID: 23974872) Ripke S … Sullivan PF (Nature genetics 2013) 3 58
  4. Novel associations for hypothyroidism include known autoimmune risk loci. (PMID: 22493691) Eriksson N … Do CB (PloS one 2012) 3 58
  5. Genome-wide association study of classical Hodgkin lymphoma and Epstein-Barr virus status-defined subgroups. (PMID: 22286212) Urayama KY … McKay JD (Journal of the National Cancer Institute 2012) 44 58

Products for HLA-DRB9 Gene

Sources for HLA-DRB9 Gene

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