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Aliases for HLA-DRB9 Gene

Aliases for HLA-DRB9 Gene

  • Major Histocompatibility Complex, Class II, DR Beta 9 (Pseudogene) 2 3 5
  • MHC Class II Antigen 3
  • HLA-DR1BL 3
  • HLA-DRB1L 3
  • D6S206E 3
  • D6S206 3

External Ids for HLA-DRB9 Gene

Previous HGNC Symbols for HLA-DRB9 Gene

  • HLA-DRB1L
  • HLA-DR1BL

Previous GeneCards Identifiers for HLA-DRB9 Gene

  • GC06M032454
  • GC06M032198
  • GC06M032498
  • GC06M032535

Summaries for HLA-DRB9 Gene

GeneCards Summary for HLA-DRB9 Gene

HLA-DRB9 (Major Histocompatibility Complex, Class II, DR Beta 9 (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-DRB9 Gene

Genomics for HLA-DRB9 Gene

Regulatory Elements for HLA-DRB9 Gene

Enhancers for HLA-DRB9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G032472 1.4 Ensembl ENCODE dbSUPER 0.7 0.0 -7 3.0 HDGF TBP PKNOX1 ATF1 NSD2 BMI1 RFX5 CBX5 ZNF143 ETV6 HLA-DQA2 HLA-DRB6 HLA-DRB1 C4A HLA-DRB5 HLA-DQA1 HLA-DQB1-AS1 HLA-DQB1 HLA-DRB9 GC06M032486
GH06G032459 1.1 FANTOM5 Ensembl 0.4 +13.5 13528 0.7 WRNIP1 ZBTB40 YY1 ZFHX2 HNF4G RELB IKZF2 EGR2 HCFC1 ZBTB11 HLA-DQA2 HLA-DRB6 HLA-DQB1 MICB HLA-DRB5 HLA-DRB1 PRRT1 GC06P032458 HLA-DRB9
GH06G032462 0.9 FANTOM5 0.4 +10.6 10618 0.2 PKNOX1 ZNF76 ZSCAN5C ZNF143 RELB IKZF2 CREM EGR2 SP3 JUNB HLA-DRB5 HLA-DRA HLA-DMA STK19 PSMB8 HLA-DMB HLA-DQB1 HLA-DRB1 GC06P032458 HLA-DRB9
GH06G032479 0.6 dbSUPER 0.4 -7.2 -7203 1.9 MTA2 JUNB TBX21 ZNF776 ARID3A ZNF366 ZNF512 RELB PRDM1 ZNF300 HLA-DRB6 HLA-DQA2 HLA-DRB1 HCG25 HLA-DRB5 BRD2 HLA-DQA1 EGFL8 VPS52 RING1
GH06G032481 0.5 dbSUPER 0.4 -9.7 -9662 2.8 ZNF366 ZNF512 ZNF300 PRDM1 HLA-DRB6 HLA-DQA2 HLA-DRB5 HLA-DQA1 EGFL8 HCG25 PPT2 LSM2 C4A BRD2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HLA-DRB9 on UCSC Golden Path with GeneCards custom track

Genomic Location for HLA-DRB9 Gene

Chromosome:
6
Start:
32,459,820 bp from pter
End:
32,473,500 bp from pter
Size:
13,681 bases
Orientation:
Minus strand

Genomic View for HLA-DRB9 Gene

Genes around HLA-DRB9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HLA-DRB9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HLA-DRB9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HLA-DRB9 Gene

Proteins for HLA-DRB9 Gene

  • Protein details for HLA-DRB9 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D7GNM9
    Recommended name:
    MHC class II antigen
    Protein Accession:
    D7GNM9

    Protein attributes for HLA-DRB9 Gene

    Size:
    89 amino acids
    Molecular mass:
    10503 Da
    Quaternary structure:
    No Data Available
  • Protein details for HLA-DRB9 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D7GNN0
    Recommended name:
    MHC class II antigen
    Protein Accession:
    D7GNN0

    Protein attributes for HLA-DRB9 Gene

    Size:
    89 amino acids
    Molecular mass:
    10489 Da
    Quaternary structure:
    No Data Available
  • Protein details for HLA-DRB9 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D7GNN1
    Recommended name:
    MHC class II antigen
    Protein Accession:
    D7GNN1

    Protein attributes for HLA-DRB9 Gene

    Size:
    89 amino acids
    Molecular mass:
    10480 Da
    Quaternary structure:
    No Data Available

neXtProt entry for HLA-DRB9 Gene

Post-translational modifications for HLA-DRB9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-DRB9 Gene

Domains & Families for HLA-DRB9 Gene

Gene Families for HLA-DRB9 Gene

Protein Domains for HLA-DRB9 Gene

Suggested Antigen Peptide Sequences for HLA-DRB9 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-DRB9: view

No data available for UniProtKB/Swiss-Prot for HLA-DRB9 Gene

Function for HLA-DRB9 Gene

Molecular function for HLA-DRB9 Gene

GENATLAS Biochemistry:
HLA-DR,beta 9 pseudogene,isolated fragment

Phenotypes for HLA-DRB9 Gene

GenomeRNAi human phenotypes for HLA-DRB9:
genes like me logo Genes that share phenotypes with HLA-DRB9: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-DRB9 Gene

Localization for HLA-DRB9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HLA-DRB9 Gene

Pathways & Interactions for HLA-DRB9 Gene

SuperPathways for HLA-DRB9 Gene

No Data Available

Interacting Proteins for HLA-DRB9 Gene

Gene Ontology (GO) - Biological Process for HLA-DRB9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-DRB9 Gene

Drugs & Compounds for HLA-DRB9 Gene

No Compound Related Data Available

Transcripts for HLA-DRB9 Gene

mRNA/cDNA for HLA-DRB9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-DRB9 Gene

No ASD Table

Relevant External Links for HLA-DRB9 Gene

GeneLoc Exon Structure for
HLA-DRB9
ECgene alternative splicing isoforms for
HLA-DRB9

Expression for HLA-DRB9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HLA-DRB9 Gene

genes like me logo Genes that share expression patterns with HLA-DRB9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-DRB9 Gene

Orthologs for HLA-DRB9 Gene

Evolution for HLA-DRB9 Gene

ENSEMBL:
Gene Tree for HLA-DRB9 (if available)
TreeFam:
Gene Tree for HLA-DRB9 (if available)

No data available for Orthologs for HLA-DRB9 Gene

Paralogs for HLA-DRB9 Gene

genes like me logo Genes that share paralogs with HLA-DRB9: view

No data available for Paralogs for HLA-DRB9 Gene

Variants for HLA-DRB9 Gene

Relevant External Links for HLA-DRB9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-DRB9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-DRB9 Gene

Disorders for HLA-DRB9 Gene

Relevant External Links for HLA-DRB9

Genetic Association Database (GAD)
HLA-DRB9
Human Genome Epidemiology (HuGE) Navigator
HLA-DRB9

No disorders were found for HLA-DRB9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-DRB9 Gene

Publications for HLA-DRB9 Gene

  1. Genome-wide association study for ulcerative colitis identifies risk loci at 7q22 and 22q13 (IL17REL). (PMID: 20228798) Franke A. … Schreiber S. (Nat. Genet. 2010) 3 46 64
  2. Nomenclature for factors of the HLA system, 1991. WHO Nomenclature Committee for factors of the HLA system. (PMID: 1529427) Bodmer J.G. … Sasazuki T. (Tissue Antigens 1992) 2 3 64
  3. Genome-wide association analysis identifies 13 new risk loci for schizophrenia. (PMID: 23974872) Ripke S. … Sullivan P.F. (Nat. Genet. 2013) 3 64
  4. Novel associations for hypothyroidism include known autoimmune risk loci. (PMID: 22493691) Eriksson N. … Do C.B. (PLoS ONE 2012) 3 64
  5. Genome-wide association study of classical Hodgkin lymphoma and Epstein-Barr virus status-defined subgroups. (PMID: 22286212) Urayama K.Y. … McKay J.D. (J. Natl. Cancer Inst. 2012) 46 64

Products for HLA-DRB9 Gene

Sources for HLA-DRB9 Gene

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