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Aliases for HLA-DRB7 Gene

Aliases for HLA-DRB7 Gene

  • Major Histocompatibility Complex, Class II, DR Beta 7 (Pseudogene) 2 3

External Ids for HLA-DRB7 Gene

Previous GeneCards Identifiers for HLA-DRB7 Gene

  • GC06U990053
  • GC06M9U0000
  • GC06M032591
  • GC06Me32591
  • GC06Pe32426
  • GC06Mo32595
  • GC06Mo32524
  • GC06M8U3934

Summaries for HLA-DRB7 Gene

GeneCards Summary for HLA-DRB7 Gene

HLA-DRB7 (Major Histocompatibility Complex, Class II, DR Beta 7 (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-DRB7 Gene

Genomics for HLA-DRB7 Gene

Regulatory Elements for HLA-DRB7 Gene

Enhancers for HLA-DRB7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G003795 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -8.6 -8573 4.1 ELF3 TBP FOXA2 ATF1 ARNT ARID4B DMAP1 ZNF48 THRB GATA2 FAM50B LOC107987516 PXDC1 HLA-DRB7 GC06M003824
GH06G003787 1 ENCODE 0.7 -0.1 -142 3.3 FOXA2 MLX ARID4B DMAP1 ZNF48 YY1 SLC30A9 PAF1 ZNF263 SP5 PXDC1 HLA-DRB7 GC06M003824
GH06G003803 1.5 Ensembl ENCODE dbSUPER 0.4 -16.4 -16404 4.6 FOXA2 PKNOX1 ATF1 ARID4B DMAP1 ZNF48 SLC30A9 FOS SP5 MXD4 LOC107987516 FAM50B GC06M003824 HLA-DRB7
GH06G003822 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -36.0 -35960 5.1 FOXA2 ARID4B SIN3A ZNF48 YY1 ZNF121 GATA2 ZNF143 FOS DEK LOC107987516 FAM50B PXDC1 GC06M003824 HLA-DRB7
GH06G003807 1.3 Ensembl ENCODE dbSUPER 0.3 -20.1 -20079 2.4 TBP SIN3A BRCA1 ZNF48 RAD21 RFX5 ZNF121 GATA2 RCOR1 FOS FAM50B GC06M003824 HLA-DRB7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HLA-DRB7 on UCSC Golden Path with GeneCards custom track

Genomic Location for HLA-DRB7 Gene

Chromosome:
6
Start:
3,769,545 bp from pter
End:
3,789,002 bp from pter
Size:
19,458 bases
Orientation:
Minus strand

Genomic View for HLA-DRB7 Gene

Genes around HLA-DRB7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for HLA-DRB7 Gene

Proteins for HLA-DRB7 Gene

  • Protein details for HLA-DRB7 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q29815
    Recommended name:
    HLA-DRB7 protein
    Protein Accession:
    Q29815

    Protein attributes for HLA-DRB7 Gene

    Size:
    29 amino acids
    Molecular mass:
    2876 Da
    Quaternary structure:
    No Data Available
  • Protein details for HLA-DRB7 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q29817
    Recommended name:
    MHC class II HLA-DR-beta-7
    Protein Accession:
    Q29817

    Protein attributes for HLA-DRB7 Gene

    Size:
    18 amino acids
    Molecular mass:
    2172 Da
    Quaternary structure:
    No Data Available
  • Protein details for HLA-DRB7 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q29818
    Recommended name:
    MHC class II HLA-DR-beta-7
    Protein Accession:
    Q29818

    Protein attributes for HLA-DRB7 Gene

    Size:
    82 amino acids
    Molecular mass:
    9789 Da
    Quaternary structure:
    No Data Available
  • Protein details for HLA-DRB7 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q29819
    Recommended name:
    MHC class II HLA-DR-beta-7
    Protein Accession:
    Q29819

    Protein attributes for HLA-DRB7 Gene

    Size:
    18 amino acids
    Molecular mass:
    2172 Da
    Quaternary structure:
    No Data Available

neXtProt entry for HLA-DRB7 Gene

Post-translational modifications for HLA-DRB7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HLA-DRB7 Gene

Domains & Families for HLA-DRB7 Gene

Gene Families for HLA-DRB7 Gene

Protein Domains for HLA-DRB7 Gene

Suggested Antigen Peptide Sequences for HLA-DRB7 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HLA-DRB7: view

No data available for UniProtKB/Swiss-Prot for HLA-DRB7 Gene

Function for HLA-DRB7 Gene

Molecular function for HLA-DRB7 Gene

GENATLAS Biochemistry:
HLA-DR,beta 7 pseudogene,found on DR4,DR7 and DR9 haplotypes

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-DRB7 Gene

Localization for HLA-DRB7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HLA-DRB7 Gene

Pathways & Interactions for HLA-DRB7 Gene

SuperPathways for HLA-DRB7 Gene

No Data Available

Interacting Proteins for HLA-DRB7 Gene

Gene Ontology (GO) - Biological Process for HLA-DRB7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HLA-DRB7 Gene

Drugs & Compounds for HLA-DRB7 Gene

No Compound Related Data Available

Transcripts for HLA-DRB7 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for HLA-DRB7 Gene

No ASD Table

Relevant External Links for HLA-DRB7 Gene

GeneLoc Exon Structure for
HLA-DRB7
ECgene alternative splicing isoforms for
HLA-DRB7

No data available for mRNA/cDNA for HLA-DRB7 Gene

Expression for HLA-DRB7 Gene

Protein differential expression in normal tissues from HIPED for HLA-DRB7 Gene

This gene is overexpressed in Skin (67.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for HLA-DRB7 Gene



Protein tissue co-expression partners for HLA-DRB7 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-DRB7 Gene

Orthologs for HLA-DRB7 Gene

No data available for Orthologs and Evolution for HLA-DRB7 Gene

Paralogs for HLA-DRB7 Gene

genes like me logo Genes that share paralogs with HLA-DRB7: view

No data available for Paralogs for HLA-DRB7 Gene

Variants for HLA-DRB7 Gene

Relevant External Links for HLA-DRB7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HLA-DRB7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-DRB7 Gene

Disorders for HLA-DRB7 Gene

No disorders were found for HLA-DRB7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HLA-DRB7 Gene

Publications for HLA-DRB7 Gene

  1. Nomenclature for factors of the HLA system, 1991. WHO Nomenclature Committee for factors of the HLA system. (PMID: 1529427) Bodmer J.G. … Sasazuki T. (Tissue Antigens 1992) 2 3 64
  2. Characterization of an HLA DR beta pseudogene. (PMID: 3856276) Larhammar D. … Peterson P.A. (Proc. Natl. Acad. Sci. U.S.A. 1985) 2 3 64
  3. Variation analysis and gene annotation of eight MHC haplotypes: the MHC Haplotype Project. (PMID: 18193213) Horton R. … Beck S. (Immunogenetics 2008) 3 64
  4. Finishing the euchromatic sequence of the human genome. (PMID: 15496913) (Nature 2004) 3 64
  5. Initial sequencing and analysis of the human genome. (PMID: 11237011) Lander E.S. … Szustakowki J. (Nature 2001) 3 64

Products for HLA-DRB7 Gene

Sources for HLA-DRB7 Gene

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