Aliases for HLA-DPA2 Gene
Aliases for HLA-DPA2 Gene
External Ids for HLA-DPA2 Gene
- HGNC: 4939
- Entrez Gene: 646702
- Ensembl: ENSG00000231461
Previous HGNC Symbols for HLA-DPA2 Gene
- HLA-DP2A
Previous GeneCards Identifiers for HLA-DPA2 Gene
- GC06U990044
- GC06M033168
- GC06M033169
- GC06M032801
Summaries for HLA-DPA2 Gene
GeneCards Summary for HLA-DPA2 Gene
HLA-DPA2 (Major Histocompatibility Complex, Class II, DP Alpha 2 (Pseudogene)) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HLA-DPA2 Gene
Genomics for HLA-DPA2 Gene
Regulatory Elements for HLA-DPA2 Gene
Enhancers for HLA-DPA2 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH06G033082 | 0.9 | ENCODE dbSUPER | 0.4 | +14.4 | 14397 | 0.2 | HDGF CTCF WRNIP1 TEAD4 TRIM22 CEBPB REST CEBPG RAD21 NR2F2 | HLA-DPB1 HLA-DPA1 HLA-DPA2 |
| GH06G033092 | 0.9 | ENCODE dbSUPER | 0.4 | +5.1 | 5117 | 0.2 | HDGF CTCF MAX TRIM22 REST ZNF48 RAD21 POLR2A ZNF143 SMC3 | HLA-DPB1 COL11A2 SLC39A7 RXRB RNY4P10 HSD17B8 MIR219A1 HLA-DPA2 HLA-DPA1 |
| GH06G033081 | 0.6 | dbSUPER | 0.4 | +15.0 | 15014 | 0.9 | HDGF CTCF POLR2A ZNF366 TRIM22 CEBPG PRDM1 NR2F2 | HLA-DPB1 HLA-DPA1 HLA-DPB2 HLA-DMA HLA-DPA2 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around HLA-DPA2 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for HLA-DPA2 Gene
- Chromosome:
- 6
- Start:
- 33,091,482 bp from pter
- End:
- 33,097,295 bp from pter
- Size:
- 5,814 bases
- Orientation:
- Minus strand
Genomic View for HLA-DPA2 Gene
Genes around HLA-DPA2 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6p21.32 by Ensembl
- 6p21.32 by Entrez Gene
- 6p21.32 by HGNC
HLA-DPA2 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HLA-DPA2 Gene
Proteins for HLA-DPA2 Gene
Post-translational modifications for HLA-DPA2 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for HLA-DPA2
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HLA-DPA2
- Origene Custom Protein Services for HLA-DPA2
- Search GeneTex for Proteins for HLA-DPA2
Assay Products
No data available for DME Specific Peptides for HLA-DPA2 Gene
Domains & Families for HLA-DPA2 Gene
Gene Families for HLA-DPA2 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HLA-DPA2 Gene
Function for HLA-DPA2 Gene
Molecular function for HLA-DPA2 Gene
- GENATLAS Biochemistry:
- HLA-DP,alpha chain-related pseudogene
Phenotypes for HLA-DPA2 Gene
- GenomeRNAi human phenotypes for HLA-DPA2:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HLA-DPA2
CRISPR Products
- Browse CRISPR knockouts for HLA-DPA2
miRNA Products
- Search ViGene Biosciences for HLA-DPA2
Inhibitory RNA Products
- Search ViGene Biosciences for HLA-DPA2
Cell Line Products
- Search ViGene Biosciences for HLA-DPA2
Flow Cytometry Products
No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HLA-DPA2 Gene
Localization for HLA-DPA2 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HLA-DPA2 Gene
Transcripts for HLA-DPA2 Gene
mRNA/cDNA for HLA-DPA2 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for HLA-DPA2
miRNA Products
- Search ViGene Biosciences for HLA-DPA2
Inhibitory RNA Products
- Search ViGene Biosciences for HLA-DPA2
Flow Cytometry Products
Expression for HLA-DPA2 Gene
mRNA differential expression in normal tissues according to GTEx for HLA-DPA2 Gene
This gene is overexpressed in Brain - Cerebellar Hemisphere (x20.7), Brain - Cerebellum (x16.6), and Small Intestine - Terminal Ileum (x5.8).
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HLA-DPA2 Gene
Orthologs for HLA-DPA2 Gene
No data available for Orthologs for HLA-DPA2 Gene
Paralogs for HLA-DPA2 Gene
No data available for Paralogs for HLA-DPA2 Gene
Variants for HLA-DPA2 Gene
Relevant External Links for HLA-DPA2 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HLA-DPA2
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HLA-DPA2 Gene
Disorders for HLA-DPA2 Gene
Relevant External Links for HLA-DPA2
- Genetic Association Database (GAD)
- HLA-DPA2
No disorders were found for HLA-DPA2 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HLA-DPA2 Gene
Publications for HLA-DPA2 Gene
- Molecular map of the human HLA-SB (HLA-DP) region and sequence of an SB alpha (DP alpha) pseudogene. (PMID: 6597088) Servenius B. … Peterson P.A. (EMBO J. 1984) 2 3 64
- A genome-wide association study identifies two new risk loci for Graves' disease. (PMID: 21841780) Chu X. … Song H.D. (Nat. Genet. 2011) 46 64
Products for HLA-DPA2 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HLA-DPA2
- Origene Custom Protein Services for HLA-DPA2
- Browse OriGene Inhibitory RNA Products For HLA-DPA2
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for HLA-DPA2
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HLA-DPA2
- GenScript: Custom all cDNA clones Services for HLA-DPA2
- GenScript Custom Purified and Recombinant Proteins Services for HLA-DPA2
- GenScript Custom Assay Services for HLA-DPA2
- GenScript Custom overexpressing Cell Line Services for HLA-DPA2
- Browse GenScript CRISPR for HLA-DPA2
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for HLA-DPA2
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HLA-DPA2
- VectorBuilder custom plasmid, inducible vectors for HLA-DPA2
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HLA-DPA2
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HLA-DPA2 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
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- (122) diseasecard
- (123) NIH Rare Diseases
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- (128) Genetics Home Reference
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- (130) MedlinePlus
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- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer