Aliases for HKR1 Gene
Aliases for HKR1 Gene
External Ids for HKR1 Gene
- HGNC: 4928
- Entrez Gene: 284459
- Ensembl: ENSG00000181666
- OMIM: 165250
- UniProtKB: P10072
Previous GeneCards Identifiers for HKR1 Gene
- GC19U990048
- GC19P042484
- GC19P042517
- GC19P037825
- GC19P034275
- GC19P037803
Summaries for HKR1 Gene
GeneCards Summary for HKR1 Gene
HKR1 (HKR1, GLI-Kruppel Zinc Finger Family Member) is a Protein Coding gene. Among its related pathways are Gene Expression. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF133.
UniProtKB/Swiss-Prot for HKR1 Gene
-
May be involved in transcriptional regulation.
No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HKR1 Gene
Genomics for HKR1 Gene
Regulatory Elements for HKR1 Gene
Enhancers for HKR1 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH19G037905 | 1.4 | ENCODE dbSUPER | 4.3 | +594.9 | 594881 | 4.2 | MLX CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF416 ZNF143 | ZNF585B LINC01535 ZNF607 WDR87 ZNF383 ZNF420 ZNF793 ZNF568 ZNF571 ZNF585A |
| GH19G038272 | 1.1 | ENCODE dbSUPER | 5.4 | +960.8 | 960827 | 3.0 | SOX13 ELF3 DRAP1 SAP130 TAF1 DMAP1 ZNF384 BCL11B YY1 RARA | C19orf33 CATSPERG DPF1 YIF1B KCNK6 SPRED3 GGN FAM98C SPINT2 HKR1 |
| GH19G036915 | 1.4 | FANTOM5 ENCODE | 2 | -396.2 | -396203 | 1.9 | PKNOX1 ARID4B SIN3A ZNF2 YY1 ZNF302 ZNF416 ZNF143 ZNF548 ZNF263 | ZNF383 ZNF345 ZNF850 ZNF790-AS1 ZNF567 ZNF793 ZNF585B ZNF529 ZNF585A ZFP82 |
| GH19G037304 | 0.4 | FANTOM5 | 4.6 | -8.4 | -8439 | 0.1 | ZNF540 ZNF793 HKR1 ZNF568 ZNF585B ZNF573 ZNF345 ZNF790 ZNF607 ZNF569 | |
| GH19G036933 | 0.4 | FANTOM5 | 1.6 | -379.0 | -378977 | 0.2 | ZNF362 | ZNF585B LINC01535 ZNF568 ZNF345 ZNF566 ZNF527 ZNF529 ZNF790 ZNF420 ZNF829 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around HKR1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for HKR1 Gene
- Chromosome:
- 19
- Start:
- 37,312,837 bp from pter
- End:
- 37,369,365 bp from pter
- Size:
- 56,529 bases
- Orientation:
- Plus strand
Genomic View for HKR1 Gene
Genes around HKR1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 19q13.12 by Ensembl
- 19q13.12 by Entrez Gene
- 19q13.13 by HGNC
HKR1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HKR1 Gene
Proteins for HKR1 Gene
-
Protein details for HKR1 Gene (UniProtKB/Swiss-Prot)
- Protein Symbol:
- P10072-HKR1_HUMAN
- Recommended name:
- Krueppel-related zinc finger protein 1
- Protein Accession:
- P10072
- A8MRS7
- Q6PJD0
- Q9BSW9
- Q9UM09
Protein attributes for HKR1 Gene
- Size:
- 659 amino acids
- Molecular mass:
- 75128 Da
- Quaternary structure:
- No Data Available
- SequenceCaution:
-
- Sequence=BAA86058.1; Type=Erroneous initiation; Evidence={ECO:0000305};
Protein Expression for HKR1 Gene
Post-translational modifications for HKR1 Gene
Other Protein References for HKR1 Gene
- ENSEMBL proteins:
-
- ENSP00000375994
- ENSP00000437774
- ENSP00000438261
- ENSP00000465297
- ENSP00000465862
- ENSP00000465884
- ENSP00000465899
- ENSP00000466360
- ENSP00000466467
- ENSP00000466472
- ENSP00000466498
- ENSP00000466533
- ENSP00000466856
- ENSP00000467562
- ENSP00000467822
- ENSP00000468176
- ENSP00000468528
- ENSP00000468572
- ENSP00000315505
- REFSEQ proteins:
-
- NP_001316690.1
- NP_001316691.1
- NP_001316692.1
- NP_001316693.1
- NP_001316694.1
- NP_001316695.1
- NP_001316696.1
- NP_001316697.1
- NP_001316698.1
- NP_001316699.1
- NP_001316700.1
- NP_001316701.1
- NP_001316702.1
- NP_001316703.1
- NP_001316704.1
- NP_001316705.1
- NP_001316706.1
- NP_001316707.1
- NP_001316708.1
- NP_861451.1
- XP_016882161.1
- XP_016882162.1
- XP_016882163.1
- XP_016882164.1
- XP_016882165.1
- XP_016882166.1
- XP_016882167.1
- XP_016882168.1
- XP_016882169.1
- XP_016882170.1
- XP_016882171.1
- XP_016882172.1
- XP_016882173.1
- XP_016882174.1
- XP_016882175.1
- XP_016882176.1
- XP_016882177.1
- XP_016882178.1
- XP_016882179.1
- XP_016882180.1
- XP_016882181.1
- XP_016882182.1
- XP_016882183.1
- XP_016882184.1
- XP_016882185.1
- XP_016882186.1
- XP_016882187.1
- XP_016882188.1
- XP_016882189.1
- XP_016882190.1
- XP_016882191.1
- XP_016882192.1
- XP_016882193.1
- XP_016882194.1
- XP_016882195.1
- XP_016882196.1
- XP_016882197.1
Antibody Products
- Novus Biologicals Antibodies for HKR1
- Invitrogen Antibodies for HKR1
- antibodies-online Antibodies for HKR1: See all 48
- GeneTex HKR1 antibody for HKR1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HKR1
- Origene Custom Protein Services for HKR1
- Novus Biologicals proteins for HKR1
- antibodies-online Proteins for HKR1: See all 3
- Search antibodies-online for peptides
- Search GeneTex for Proteins for HKR1
Assay Products
No data available for DME Specific Peptides for HKR1 Gene
Domains & Families for HKR1 Gene
Gene Families for HKR1 Gene
Protein Domains for HKR1 Gene
- InterPro:
- Blocks:
- ProtoNet:
Suggested Antigen Peptide Sequences for HKR1 Gene
- GenScript: Design optimal peptide antigens:
Graphical View of Domain Structure for InterPro Entry
P10072- Family:
-
- Belongs to the krueppel C2H2-type zinc-finger protein family.
Function for HKR1 Gene
Molecular function for HKR1 Gene
- GENATLAS Biochemistry:
- GLI-Kruppel family member HKR1
- UniProtKB/Swiss-Prot Function:
- May be involved in transcriptional regulation.
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | -- |
| GO:0046872 | metal ion binding | IEA | -- |
Phenotypes for HKR1 Gene
- GenomeRNAi human phenotypes for HKR1:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
-
ViGene Biosciences lentiviral particle packaged cDNA for HKR1 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for HKR1 gene
- Search ViGene Biosciences for HKR1
CRISPR Products
-
OriGene CRISPR knockouts for HKR1
-
Santa Cruz Biotechnology (SCBT) CRISPR for HKR1
- GenScript: Design CRISPR guide RNA sequences for HKR1
miRNA for HKR1 Gene
- miRTarBase miRNAs that target HKR1
miRNA Products
- Search ViGene Biosciences for HKR1
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for HKR1
- Browse OriGene Inhibitory RNA Products For HKR1
-
ViGene Biosciences ready-to-package AAV shRNAs for HKR1 gene
Cell Line Products
-
Horizon Cell Lines for HKR1
-
ViGene Biosciences adenoviral particle packaged cDNA for HKR1 gene
-
ViGene Biosciences lentiviral particle packaged cDNA for HKR1 gene
-
ViGene Biosciences ready-to-package AAV shRNAs for HKR1 gene
Flow Cytometry Products
No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for HKR1 Gene
Localization for HKR1 Gene
Subcellular locations from UniProtKB/Swiss-Prot for HKR1 Gene
- Nucleus.
| Compartment | Confidence |
|---|---|
| nucleus | 5 |
| mitochondrion | 2 |
| cytosol | 2 |
| golgi apparatus | 2 |
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005622 | intracellular | IEA | -- |
| GO:0005634 | nucleus | IEA | -- |
Pathways & Interactions for HKR1 Gene
| SuperPathway | Contained pathways | ||
|---|---|---|---|
| 1 | Gene Expression |
.48
|
|
Pathways by source for HKR1 Gene
2 Reactome pathways for HKR1 Gene
Interacting Proteins for HKR1 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006351 | transcription, DNA-templated | IEA | -- |
| GO:0006355 | regulation of transcription, DNA-templated | NAS,IEA | 2850480 |
| GO:0007275 | multicellular organism development | NAS | 2850480 |
No data available for SIGNOR curated interactions for HKR1 Gene
Transcripts for HKR1 Gene
mRNA/cDNA for HKR1 Gene
- (57) REFSEQ mRNAs :
- (20) Additional mRNA sequences :
- (200) Selected AceView cDNA sequences:
- (27) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for HKR1 Gene
CRISPR Products
-
OriGene CRISPR knockouts for HKR1
-
Santa Cruz Biotechnology (SCBT) CRISPR for HKR1
- GenScript: Design CRISPR guide RNA sequences for HKR1
miRNA Products
- Search ViGene Biosciences for HKR1
Inhibitory RNA Products
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for HKR1
- Browse OriGene Inhibitory RNA Products For HKR1
-
ViGene Biosciences ready-to-package AAV shRNAs for HKR1 gene
Flow Cytometry Products
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | · | 1e | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | · | 5c | ^ | 6a | · | 6b | ^ | 7a | · | 7b | · | 7c | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11a | · | 11b | · | 11c | · | 11d | · | 11e | · | 11f | · | 11g | · |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SP1: | - | - | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||
| SP2: | - | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||
| SP3: | - | - | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||
| SP4: | - | - | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||
| SP5: | - | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||||
| SP6: | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||||||
| SP7: | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||
| SP8: | - | - | - | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||
| SP9: | - | - | - | - | - | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||||||||||
| SP10: | - | - | - | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||||||||||
| SP11: | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||||
| SP12: | - | - | ||||||||||||||||||||||||||||||||||||||||||||||||||
| SP13: | - | - | - |
| ExUns: | 11h | · | 11i | · | 11j | · | 11k |
|---|---|---|---|---|---|---|---|
| SP1: | |||||||
| SP2: | |||||||
| SP3: | |||||||
| SP4: | |||||||
| SP5: | |||||||
| SP6: | |||||||
| SP7: | |||||||
| SP8: | |||||||
| SP9: | |||||||
| SP10: | |||||||
| SP11: | |||||||
| SP12: | |||||||
| SP13: |
Expression for HKR1 Gene
This gene is overexpressed in Islet of Langerhans (34.7) and Breast (34.3).
Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for HKR1 Gene
- Elite partner
NURSA nuclear receptor signaling pathways regulating expression of HKR1 Gene:
HKR1SOURCE GeneReport for Unigene cluster for HKR1 Gene:
Hs.657027Evidence on tissue expression from TISSUES for HKR1 Gene
- Nervous system(3.8)
- Eye(2.4)
Primer Products
-
OriGene qPCR primer pairs for HKR1
-
OriGene qPCR primer pairs and template standards for HKR1
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for HKR1 Gene
Orthologs for HKR1 Gene
This gene was present in the common ancestor of animals and fungi.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | HKR1 34 35 |
|
||
| dog (Canis familiaris) |
Mammalia | HKR1 34 35 |
|
||
| cow (Bos Taurus) |
Mammalia | HKR1 34 |
|
||
| baker's yeast (Saccharomyces cerevisiae) |
Saccharomycetes | TDA9 37 |
|
|
- Species where no ortholog for HKR1 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- mouse (Mus musculus)
- oppossum (Monodelphis domestica)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- platypus (Ornithorhynchus anatinus)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- tropical clawed frog (Silurana tropicalis)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
- zebrafish (Danio rerio)
Paralogs for HKR1 Gene
(604) SIMAP similar genes for HKR1 Gene using alignment to 16 proteins:
- FAM3A
- UBIAD1
- CTSS
- DAPK2
- CRCP
- ERBB2
- TNFRSF17
- ATL2
- kr-znf3
- NEK4
- TSEN2
- FAM210A
- TMEM14B
- PRMD9
- UTY
- KDM5B
- LINC00596
- PPIP5K2
- LOC101928664
- LYRM4
- C4orf22
- NSRP1
- SLC4A8
- PRDM9
- ZNF78L1
- ZFS-4
- ZBTB32
- NF2
- BECN1
- ASB11
- FP1523
- HMGA2
- ZNF169
- ZSCAN16
- POM121C
- KRBOX1
- MPP4
- FIK
- FLJ00301
- ZNF433
- ZNF250
- ZNF826P
- ZNF500
- ZNF212
- SEPT2
- HZF36
- CHID1
- ZNF331
- MGC12518
- FAM175A
- ZNF323
- SPSB4
- PTPLA
- ZNF320
- LAMB4
- DKFZp666M039
- FKBP3
- DKFZp313M0722
- ZNF649
- ZNF56
- ZNF213
- ZNF148
- ZNF146
- DKFZp686D2168
- C16orf89
- DNMT1
- ZNF707
- ZNF761
- ZNF283
- ZNF577
- ZNF616
- ZNF696
- ZNF420
- ZNF300
- ZNF721
- ZNF818P
- ZNF660
- ZFS-5
- TCF4
- SHANK2
- ZNF774
- DKFZp666C237
- DKFZp686M04222
- ZNF738
- ZNF
- ZNF697
- ZNF497
- ZFP90
- ZNF124
- ZNF79
- ZNF224
- ZNF624
- ZNF225
- ZSCAN30
- ZNF32
- ZNF204
- ZKSCAN1
- HZF16
- ZNF852
- OCEL1
- HZF30
- ZNF83
- ZNF415
- KLF4
- ZNF835
- ZNF720
- ZFP2
- ZNF81
- ZNF569
- ZNF84
- ZSCAN31
- ZNF133
- ZFP112
- ZNF844
- ZNF625
- ZNF3
- zf30
- ZSCAN29
- ZNF542
- ZNF25
- NSD1
- ZNF391
- ZNF358
- ZNF239
- DAPL1
- DCTN5
- A-328A3.4
- ZNF419
- ZNF324B
- ZNF691
- ZFS-1
- ZNF175
- ZSCAN23
- ZNF677
- ZNF564
- ZNF157
- ZNF286B
- ZKSCAN7
- ZNF350
- ZNF263
- ZNF664
- ZNF449
- ZNF167
- ZFS-6
- USP10
- SPATS2L
- MYNN
- KLF13
- ZNF883
- ZNF771
- ZNF492
- DKFZp762K012
- DKFZp434G1930
- ZNF354A
- ZNF28
- ZNF416
- ZNF529
- ZNF271
- ZNF485
- ZNF572
- ZNF7
- ZNF737
- ZNF623
- ZNF557
- HZF14
- AURA2
- ZNF619
- ZNF589
- ZNF461
- ZNF585B
- ZNF2
- ZNF155
- ZNF773
- ZFP3
- ZNF626
- ZNF525
- ZNF846
- ZNF85
- ZNF833P
- ZNF780B
- ZNF501
- ZNF282
- ZNF260
- ZKSCAN8
- MZF1
- ZNF836
- ZNF16
- Nbla00121
- DKFZp686L0787
- DKFZp547L155
- ZNF140
- ZNF611
- ZNF337
- ZNF814
- ZNF808
- ZNF878
- ZNF708
- ZNF266
- ZNF132
- ZNF112
- ZNF226
- ZNF763
- DKFZp686H20223
- DKFZp571N1833
- ZNF544
- ZNF345
- ZNF93
- smap-7
- ZSCAN22
- ZNF876P
- ZNF688
- ZNF648
- ZNF558
- ZNF274
- ZNF256
- ZNF154
- REST
- HZF40
- ZSCAN20
- ZNF778
- ZNF735
- ZNF73
- ZNF714
- ZNF35
- HZF41
- DNAPTP3
- DKFZp686O1631
- DKFZp686N0199
- DKFZp434J0650
- ZNF596
- ZNF879
- ZNF841
- ZNF548
- ZNF829
- ZNF594
- ZNF205
- RhitH
- KLF1
- ZNF791
- ZNF439
- ZNF26
- ZNF235
- ZNF17
- ZNF630
- ZNF273
- ZNF135
- ZNF705A
- ZKSCAN3
- ZNF583
- DKFZp686B16128
- ZNF138
- ZNF565
- ZNF324
- ZNF615
- ZNF10
- ZNF718
- ZNF141
- ZNF816
- ZNF71
- ZNF669
- ZNF629
- ZNF329
- ZNF682
- ZNF585A
- ZNF850
- ZNF567
- ZNF254
- ZNF418
- ZNF234
- ZNF66
- ZNF506
- ZSCAN5A
- ZNF80
- ZNF702P
- ZNF692
- ZNF556
- ZNF490
- ZNF45
- ZNF410
- ZNF394
- ZNF137P
- ZFP41
- ZNF805
- ZNF530
- ZNF443
- ZNF347
- FIZ1
- ZNF180
- ZNF98
- ZNF528
- ZNF12
- ZNF468
- ZNF304
- ZNF670
- ZNF300P1
- ZNF709
- ZNF70
- ZNF287
- DKFZp686N14223
- GLT8D2
- GLI4
- ZNF586
- ZNF471
- ZNF22
- GZF1
- ZNF268
- ZNF600
- ZNF436
- ZSCAN2
- ZNF775
- ZNF14
- ZNF117
- ZNF782
- ZNF248
- ZNF286A
- ZNF19
- ZNF72
- ZNF498
- ZNF417
- CNOT2
- ZNF551
- ZNF43
- ZNF559
- ZNF502
- ZNF484
- ZNF182
- ZNF780A
- ZNF426
- ZNF823
- ZNF675
- ZNF383
- ZNF684
- ZNF549
- ZNF222
- ZNF789
- ZNF587
- ZNF101
- ZNF695
- ZNF343
- ZNF227
- ZNF724P
- ZNF100
- ZNF546
- ZFP1
- ZNF717
- ZSCAN21
- ZNF621
- ZNF547
- ZNF470
- ZNF605
- HZF11
- ZNF264
- ZNF232
- ZFP28
- ZNF550
- ZNF793
- ZNF726P1
- ZNF672
- ZNF55
- ZNF189
- PLZF
- OSR2
- ZNF799
- ZNF736
- ZNF732
- ZNF658B
- ZNF429
- DKFZp686O111
- DKFZp686G16228
- ZNF432
- ZNF614
- ZNF267
- ZNF33B
- ZNF627
- ZNF253
- ZNF33A
- ZNF665
- ZNF184
- ZNF257
- ZNF613
- ZNF479
- ZNF786
- ZNF75A
- ZNF658
- ZNF566
- ZNF679
- ZNF662
- ZNF229
- DKFZp686K03205
- ZNF354B
- ZNF41
- ZNF317
- ZNF570
- ZNF230
- ZNF92
- ZNF699
- ZNF57
- LOC126295
- ZNF430
- DKFZp434G1621
- ZNF582
- ZNF678
- ZNF90
- ZNF44
- ZSCAN32
- ZSCAN25
- ZNF76
- ZNF521
- ZNF516
- ZNF23
- ZFS-2
- HZF17
- ZNF493
- ZNF473
- ZNF355P
- ZNF251
- ZFP92
- DKFZp686J1732
- CATSPERG
- DKFZp570I0164
- BCL6B
- ZNF766
- ZNF788
- ZNF595
- ZNF728
- ZNF543
- ZNF460
- ZNF211
- ZNF620
- ZNF562
- ZNF160
- ZNFN1A2
- ZNF571
- ZNF563
- ZFP37
- KRBOX4
- ZNF726
- ZNF643
- ZNF177
- ZFP69B
- ZNF510
- ZNF599
- ZNF514
- ZNF134
- ZNF813
- ZNF768
- ZNF716
- ZNF676
- ZNF534
- ZNF776
- ZNF20
- ZNF431
- ZNF382
- ZNF114
- ZNF107
- ZFS-3
- MST154
- KBP-1
- HKR3
- ZNF730
- ZNF710
- ZNF610
- ZNF555
- ZNF441
- ZNF322
- ZNF181
- ZNF578
- ZNF667
- ZIK1
- ZNF681
- ZNF561
- ZNF568
- ZNF674
- ZNF880
- ZSCAN12
- ZNF195
- ZNF607
- ZNF700
- ZNF540
- ZNF214
- ZNF575
- ZFP14
- ZNF790
- ZNF223
- ZNF136
- KIAA1829
- ZNF30
- ZNF442
- ZNF208
- ZIM3
- LRTOMT
- IKZF2
- ZNF792
- ZNF772
- ZNF354C
- ZNF285A
- ZFP62
- DKFZp547H249
- ZNF527
- ZNF99
- ZNF701
- ZBTB17
- ZNF486
- ZNF765
- ZF6
- ZNF34
- ZNF275
- ZNF845
- ZNF121
- ZNF491
- ZNF69
- ZNF554
- ZNF671
- ZNF705F
- ZNF705E
- ZNF584
- WT1
- HZF28
- ZNF729
- ZNF573
- DKFZp686H10254
- CTCFL
- APOD
- ZFP30
- ZBTB47
- ZNF606
- ZSCAN26
- ZNF560
- ZNF860
- ZNF680
- ZNF221
- ZNF219
- ZNF197
- ZFP82
- ZNF404
- ZNF311
- GD
- DKFZp686C13142
- ZNF787
- ZNF467
- ZNF302
- ZNF587B
- ZNF366
- GFI1B
- ZNF483
- ZNF333
- RBAK
- ZNF837
- ZNF74
- ZNF454
- ZNF397
- ZNF285
- ZFP69
- ZNF37A
- ZNF334
- ZNF727
- DKFZp572F2170
- ZNF480
- ZNF840
- ZNF785
- ZSCAN9
- ZNF705G
- ZNF689
- ZNF581
- ZNF552
- ZNF425
- ZNF91
- ZNF812
- GFI1
- ZNF517
- ZKSCAN4
- ZNF888
- ZNF749
- MAZ
- ZNF891
- TIPUH1
- ZNF233
- ZNF8
- ZNF519
- ZNF655
- ZSCAN10
- ZNF770
- ZNF713
- ZNF284
- ZBTB41
- TMSB15B
- RREB1
- PLAGL1
- HDGFRP2
- ATP6V0A1
- ECD
- ZNF77
- ZNF202
- GTF3A
- ZNF165
- PRDM5
- ZNF705D
- ZNF705B
- CCDC132
- ZNF440
- ZNF48
- REPIN1
- ZNF597
- QRICH2
Pseudogenes.org Pseudogenes for HKR1 Gene
Variants for HKR1 Gene
| SNP ID | Clin | Chr 19 pos | Sequence Context | AA Info | Type |
|---|---|---|---|---|---|
| rs1000052138 | -- | 37,336,560(+) | TCCCA(A/G)AGTGC | intron-variant | |
| rs1000110173 | -- | 37,338,279(+) | CACCA(C/G/T)GCCCG | intron-variant | |
| rs1000212088 | -- | 37,353,030(+) | TACTA(C/T)GCCCA | intron-variant | |
| rs1000225887 | -- | 37,338,045(+) | TCATT(A/T)GAGAG | intron-variant | |
| rs1000249682 | -- | 37,343,586(+) | GTTCT(C/T)CTCCA | intron-variant, upstream-variant-2KB |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| esv2758759 | CNV | loss | 17122850 |
| nsv9718 | CNV | loss | 18304495 |
Residual Variation Intolerance Score:
91.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score:
10.38;
90.83% of all genes are more intolerant (likely to be disease-causing)
Relevant External Links for HKR1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HKR1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for HKR1 Gene
Disorders for HKR1 Gene
Relevant External Links for HKR1
- Atlas of Genetics and Cytogenetics in Oncology and Haematology:
- HKR1
No disorders were found for HKR1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for HKR1 Gene
Publications for HKR1 Gene
- The Kruppel-type zinc finger family gene, HKR1, is induced in lung cancer by exposure to platinum drugs. (PMID: 9813242) Oguri T. … Watanabe H. (Gene 1998) 2 3 4 64
- The GLI-Kruppel family of human genes. (PMID: 2850480) Ruppert J.M. … Vogelstein B. (Mol. Cell. Biol. 1988) 2 3 4 64
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
- Scaffold Protein Ahk1, Which Associates with Hkr1, Sho1, Ste11, and Pbs2, Inhibits Cross Talk Signaling from the Hkr1 Osmosensor to the Kss1 Mitogen-Activated Protein Kinase. (PMID: 26787842) Nishimura A. … Tatebayashi K. (Mol. Cell. Biol. 2016) 3 64
- The protein interaction landscape of the human CMGC kinase group. (PMID: 23602568) Varjosalo M. … Gstaiger M. (Cell Rep 2013) 3 64
Products for HKR1 Gene
- Browse R&D Systems for Antibodies
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- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HKR1
- Origene Custom Protein Services for HKR1
- Origene shRNA, siRNA, and RNAi products in human, mouse, rat for HKR1
- Browse OriGene Inhibitory RNA Products For HKR1
- OriGene qPCR primer pairs and template standards for HKR1
- OriGene qPCR primer pairs for HKR1
- OriGene CRISPR knockouts for HKR1
- OriGene ORF clones in human for HKR1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HKR1
- GenScript: Next-day shipping cDNA ORF clone for HKR1 in any vector
- GenScript Custom Purified and Recombinant Proteins Services for HKR1
- GenScript Custom Assay Services for HKR1
- GenScript Custom overexpressing Cell Line Services for HKR1
- GenScript: Design CRISPR guide RNA sequences for HKR1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for HKR1
- Browse Sino Biological cDNA Clones
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- Sino Biological Antibodies
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- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals Antibodies for HKR1
- Novus Biologicals proteins for HKR1
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- antibodies-online Antibodies for HKR1: See all 48
- Search antibodies-online for kits
- antibodies-online Proteins for HKR1: See all 3
- Search antibodies-online for peptides
- GeneTex HKR1 antibody for HKR1
- Search GeneTex for Proteins for HKR1
- ViGene Biosciences adenoviral particle packaged cDNA for HKR1 gene
- ViGene Biosciences lentiviral particle packaged cDNA for HKR1 gene
- ViGene Biosciences ready-to-package AAV shRNAs for HKR1 gene
- Search ViGene Biosciences for HKR1
- Horizon Cell Lines for HKR1
- Cyagen custom Knockout/knockin (KOKI) mouse models for HKR1
- VectorBuilder custom plasmid, inducible vectors for HKR1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HKR1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HKR1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
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- (15) Blocks
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- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
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- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
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- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
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- (92) Vector BioLabs
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- (100) COMPARTMENTS
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- (112) GeneTex
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- (154) TISSUES
- (155) Gene ORGANizer