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Aliases for HIST2H3PS2 Gene

Aliases for HIST2H3PS2 Gene

  • Histone Cluster 2, H3, Pseudogene 2 2 3
  • Histone 2, H3, Pseudogene 2 2 3
  • P06 3

External Ids for HIST2H3PS2 Gene

Summaries for HIST2H3PS2 Gene

GeneCards Summary for HIST2H3PS2 Gene

HIST2H3PS2 (Histone Cluster 2, H3, Pseudogene 2) is a Pseudogene. An important paralog of this gene is HIST2H3A.

Gene Wiki entry for HIST2H3PS2 Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIST2H3PS2 Gene

Genomics for HIST2H3PS2 Gene

Genomic Location for HIST2H3PS2 Gene

Start:
143,905,510 bp from pter
End:
143,905,966 bp from pter
Size:
457 bases
Orientation:
Minus strand

Genomic View for HIST2H3PS2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for HIST2H3PS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIST2H3PS2 Gene

No data available for Regulatory Elements for HIST2H3PS2 Gene

Proteins for HIST2H3PS2 Gene

  • Protein details for HIST2H3PS2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q5TEC6-Q5TEC6
    Recommended name:
    Histone H3
    Protein Accession:
    Q5TEC6
    Secondary Accessions:

    Protein attributes for HIST2H3PS2 Gene

    Size:
    136 amino acids
    Molecular mass:
    15430 Da
    Quaternary structure:
    • The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.

    Three dimensional structures from OCA and Proteopedia for HIST2H3PS2 Gene

neXtProt entry for HIST2H3PS2 Gene

Proteomics data for HIST2H3PS2 Gene at MOPED

Post-translational modifications for HIST2H3PS2 Gene

No Post-translational modifications

Other Protein References for HIST2H3PS2 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for HIST2H3PS2 Gene

Domains for HIST2H3PS2 Gene

Gene Families for HIST2H3PS2 Gene

HGNC:
  • HIST :Histones / Replication-dependent

Protein Domains for HIST2H3PS2 Gene

genes like me logo Genes that share domains with HIST2H3PS2: view

No data available for UniProtKB/Swiss-Prot for HIST2H3PS2 Gene

Function for HIST2H3PS2 Gene

Gene Ontology (GO) - Molecular Function for HIST2H3PS2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding --
GO:0005515 protein binding --
GO:0046982 protein heterodimerization activity --
genes like me logo Genes that share ontologies with HIST2H3PS2: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for HIST2H3PS2 Gene

Localization for HIST2H3PS2 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for HIST2H3PS2 Gene COMPARTMENTS Subcellular localization image for HIST2H3PS2 gene
Compartment Confidence
nucleus 3
cytoskeleton 2
extracellular 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for HIST2H3PS2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000786 nucleosome --
GO:0005634 nucleus --
genes like me logo Genes that share ontologies with HIST2H3PS2: view

Pathways for HIST2H3PS2 Gene

SuperPathways for HIST2H3PS2 Gene

No Data Available

Interacting Proteins for HIST2H3PS2 Gene

Gene Ontology (GO) - Biological Process for HIST2H3PS2 Gene

None

No data available for Pathways by source for HIST2H3PS2 Gene

Transcripts for HIST2H3PS2 Gene

mRNA/cDNA for HIST2H3PS2 Gene

(1) REFSEQ mRNAs :
(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HIST2H3PS2 Gene

No ASD Table

Relevant External Links for HIST2H3PS2 Gene

GeneLoc Exon Structure for
HIST2H3PS2
ECgene alternative splicing isoforms for
HIST2H3PS2

Expression for HIST2H3PS2 Gene

mRNA expression in normal human tissues for HIST2H3PS2 Gene

mRNA expression in normal human tissues for HIST2H3PS2 Gene

Integrated Proteomics: protein expression from MaxQB for HIST2H3PS2 Gene

genes like me logo Genes that share expressions with HIST2H3PS2: view

Orthologs for HIST2H3PS2 Gene

This gene was present in the common ancestor of animals.

Orthologs for HIST2H3PS2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 37
  • 97 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia -- 37
  • 97 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Hist2h3c1 37
  • 97 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 97 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia HIST2H3PS2 37
  • 91 (a)
OneToOne
chicken
(Gallus gallus)
Aves H3-I 37
  • 97 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia HIST2H3PS2 37
  • 97 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii hist2h3c 37
  • 97 (a)
OneToMany
HIST2H3PS2 (1 of 2) 37
  • 97 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta His3:CG33833 37
  • 97 (a)
OneToMany
His3:CG33851 37
  • 97 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea his-13 37
  • 95 (a)
OneToMany
his-17 37
  • 95 (a)
OneToMany
his-2 37
  • 95 (a)
OneToMany
his-25 37
  • 95 (a)
OneToMany
his-27 37
  • 95 (a)
OneToMany
his-32 37
  • 95 (a)
OneToMany
his-40 37
  • 95 (a)
OneToMany
his-42 37
  • 95 (a)
OneToMany
his-45 37
  • 95 (a)
OneToMany
his-49 37
  • 95 (a)
OneToMany
his-55 37
  • 95 (a)
OneToMany
his-59 37
  • 95 (a)
OneToMany
his-6 37
  • 95 (a)
OneToMany
his-63 37
  • 95 (a)
OneToMany
his-9 37
  • 95 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 97 (a)
ManyToMany
Species with no ortholog for HIST2H3PS2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for HIST2H3PS2 Gene

ENSEMBL:
Gene Tree for HIST2H3PS2 (if available)
TreeFam:
Gene Tree for HIST2H3PS2 (if available)

Paralogs for HIST2H3PS2 Gene

Paralogs for HIST2H3PS2 Gene

Selected SIMAP similar genes for HIST2H3PS2 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with HIST2H3PS2: view

Variants for HIST2H3PS2 Gene

Relevant External Links for HIST2H3PS2 Gene

HapMap Linkage Disequilibrium report
HIST2H3PS2

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for HIST2H3PS2 Gene

Disorders for HIST2H3PS2 Gene

(2) University of Copenhagen DISEASES for HIST2H3PS2 Gene

genes like me logo Genes that share disorders with HIST2H3PS2: view

No data available for UniProtKB/Swiss-Prot for HIST2H3PS2 Gene

Publications for HIST2H3PS2 Gene

  1. Human spleen histone H3. Isolation and amino acid sequence. (PMID: 7309716) Ohe Y. … Iwai K. (J. Biochem. 1981) 3
  2. Identification of a novel phosphorylation site on histone H3 coupled with mitotic chromosome condensation. (PMID: 10464286) Goto H. … Inagaki M. (J. Biol. Chem. 1999) 3
  3. Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins. (PMID: 11242053) Lachner M. … Jenuwein T. (Nature 2001) 3
  4. Aurora-B phosphorylates Histone H3 at serine28 with regard to the mitotic chromosome condensation. (PMID: 11856369) Goto H. … Inagaki M. (Genes Cells 2002) 3
  5. The human and mouse replication-dependent histone genes. (PMID: 12408966) Marzluff W.F. … Maltais L.J. (Genomics 2002) 3

Products for HIST2H3PS2 Gene

Sources for HIST2H3PS2 Gene

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