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HIST2H3DP1 Gene(Pseudogene)

Histone Cluster 2 H3 Family Member D Pseudogene 1

GCID:
GC01M121118
GIFtS:
11
Genes Participants
UDN Logo

Aliases for HIST2H3DP1 Gene

Aliases for HIST2H3DP1 Gene

  • Histone Cluster 2 H3 Family Member D Pseudogene 1 2 3 5
  • Histone Cluster 2, H3d Pseudogene 1 2 3
  • P05 3

External Ids for HIST2H3DP1 Gene

Previous GeneCards Identifiers for HIST2H3DP1 Gene

  • GC01P120911
  • GC01P120914
  • GC01P120918
  • GC00U935972

Summaries for HIST2H3DP1 Gene

Entrez Gene Summary for HIST2H3DP1 Gene

  • Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is a histone pseudogene found on chromosome 1. [provided by RefSeq, Oct 2015]

GeneCards Summary for HIST2H3DP1 Gene

HIST2H3DP1 (Histone Cluster 2 H3 Family Member D Pseudogene 1) is a Pseudogene.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIST2H3DP1 Gene

Genomics for HIST2H3DP1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for HIST2H3DP1 Gene


Promoters for HIST2H3DP1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000012557 1109 3000

Genomic Location for HIST2H3DP1 Gene

Chromosome:
1
Start:
121,118,195 bp from pter
End:
121,118,610 bp from pter
Size:
416 bases
Orientation:
Minus strand

Genomic View for HIST2H3DP1 Gene

Genes around HIST2H3DP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIST2H3DP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIST2H3DP1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HIST2H3DP1 Gene

Proteins for HIST2H3DP1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HIST2H3DP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIST2H3DP1 Gene

Domains & Families for HIST2H3DP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIST2H3DP1 Gene

Function for HIST2H3DP1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIST2H3DP1 Gene

Localization for HIST2H3DP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HIST2H3DP1 Gene

Pathways & Interactions for HIST2H3DP1 Gene

SuperPathways for HIST2H3DP1 Gene

PathCards logo More details on SuperPathways for HIST2H3DP1
No Data Available

Interacting Proteins for HIST2H3DP1 Gene

Gene Ontology (GO) - Biological Process for HIST2H3DP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HIST2H3DP1 Gene

Drugs & Compounds for HIST2H3DP1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HIST2H3DP1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HIST2H3DP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HIST2H3DP1 Gene

No ASD Table

Relevant External Links for HIST2H3DP1 Gene

GeneLoc Exon Structure for
HIST2H3DP1
ECgene alternative splicing isoforms for
HIST2H3DP1

Expression for HIST2H3DP1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HIST2H3DP1 Gene

mRNA expression in normal human tissues for HIST2H3DP1 Gene
mRNA expression by GTEx for HIST2H3DP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of HIST2H3DP1 Gene:

HIST2H3DP1
genes like me logo Genes that share expression patterns with HIST2H3DP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIST2H3DP1 Gene

Orthologs for HIST2H3DP1 Gene

Evolution for HIST2H3DP1 Gene

ENSEMBL:
Gene Tree for HIST2H3DP1 (if available)
TreeFam:
Gene Tree for HIST2H3DP1 (if available)

No data available for Orthologs for HIST2H3DP1 Gene

Paralogs for HIST2H3DP1 Gene

No data available for Paralogs for HIST2H3DP1 Gene

Variants for HIST2H3DP1 Gene

Relevant External Links for HIST2H3DP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIST2H3DP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIST2H3DP1 Gene

Disorders for HIST2H3DP1 Gene

No disorders were found for HIST2H3DP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIST2H3DP1 Gene

Publications for HIST2H3DP1 Gene

  1. The human histone H3 complement anno 2011. (PMID: 21782046) Ederveen T.H. … Logie C. (Biochim. Biophys. Acta 2011) 2 3 64

Products for HIST2H3DP1 Gene

Sources for HIST2H3DP1 Gene

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