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Aliases for HIST1H4PS1 Gene

Subcategory (RNA class) for HIST1H4PS1 Gene

lncRNA

Aliases for HIST1H4PS1 Gene

  • Histone Cluster 1 H4 Pseudogene 1 2 3
  • H4 Histone Family, Member F, Pseudogene 2 3
  • Histone 1, H4, Pseudogene 1 2 3
  • Histone Cluster 1, H4, Pseudogene 1 2
  • AL009179.1 5
  • DJ97D16.3 3
  • PH4/F 3
  • H4FFP 3

External Ids for HIST1H4PS1 Gene

ORGUL Members for HIST1H4PS1 Gene

Previous HGNC Symbols for HIST1H4PS1 Gene

  • H4FFP

Previous GeneCards Identifiers for HIST1H4PS1 Gene

  • GC06P027882
  • GC06P027775
  • GC06P027583
  • GC06P027779

Summaries for HIST1H4PS1 Gene

Entrez Gene Summary for HIST1H4PS1 Gene

  • Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This histone pseudogene is found in the small histone gene cluster on chromosome 6. [provided by RefSeq, Oct 2015]

GeneCards Summary for HIST1H4PS1 Gene

HIST1H4PS1 (Histone Cluster 1 H4 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HIST1H4PS1 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIST1H4PS1 Gene

Genomics for HIST1H4PS1 Gene

Regulatory Elements for HIST1H4PS1 Gene

Enhancers for HIST1H4PS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H027887 1.8 FANTOM5 ENCODE dbSUPER 9.9 +86.4 86406 11 ZFP64 DMAP1 YY1 ZNF143 NFYC SSRP1 ZNF610 RCOR2 NBN NR2C1 ZKSCAN4 ZKSCAN8 ZKSCAN3 ZSCAN9 ZNF603P ZSCAN12 ZSCAN26 HIST1H4K HIST1H3H HIST1H2BN
GH06H027157 1.4 Ensembl ENCODE 12.1 -649.2 -649239 1 HDGF FOXA2 ARNT YBX1 ZNF2 ZNF766 ZNF143 ZNF207 FOS SP3 ABT1 ZKSCAN8 BTN2A3P BTN3A2 HMGN4 BTN2A2 ZNF322 HIST1H4PS1 HIST1H2AI HIST1H2BL
GH06H027776 1.3 FANTOM5 ENCODE 11.3 -29.4 -29433 1 ARNT YY1 GTF3C2 ZNF766 RUNX3 SMARCB1 ZNF592 MEF2D ZNF610 SMARCA4 ZKSCAN8 ZNF603P ZSCAN12 ZKSCAN3 ZSCAN23 ZKSCAN4 HIST1H4PS1 HIST1H2AI HIST1H2BL RNU6-471P
GH06H027761 0.6 Ensembl 11.5 -45.5 -45475 0 EGR1 TARDBP NR2F1 CEBPB NBN MAX RUNX3 HIST1H2AI HIST1H2BL HIST1H4PS1 RNU6-471P LOC100131289 TRV-AAC1-5
GH06H027770 0.4 ENCODE 11.6 -36.2 -36169 0 POLR2A POU5F1 ZNF603P HIST1H2AI HIST1H2BL HIST1H4PS1 HIST1H3J HIST1H4K PIR59721 LOC100131289
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HIST1H4PS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HIST1H4PS1 Gene

Chromosome:
6
Start:
27,807,075 bp from pter
End:
27,807,339 bp from pter
Size:
265 bases
Orientation:
Plus strand

Genomic View for HIST1H4PS1 Gene

Genes around HIST1H4PS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIST1H4PS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIST1H4PS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIST1H4PS1 Gene

Proteins for HIST1H4PS1 Gene

Post-translational modifications for HIST1H4PS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIST1H4PS1 Gene

Domains & Families for HIST1H4PS1 Gene

Gene Families for HIST1H4PS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HIST1H4PS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIST1H4PS1 Gene

Function for HIST1H4PS1 Gene

Phenotypes From GWAS Catalog for HIST1H4PS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HIST1H4PS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIST1H4PS1 Gene

Localization for HIST1H4PS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HIST1H4PS1 Gene

Pathways & Interactions for HIST1H4PS1 Gene

SuperPathways for HIST1H4PS1 Gene

No Data Available

Interacting Proteins for HIST1H4PS1 Gene

Gene Ontology (GO) - Biological Process for HIST1H4PS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HIST1H4PS1 Gene

Drugs & Compounds for HIST1H4PS1 Gene

No Compound Related Data Available

Transcripts for HIST1H4PS1 Gene

mRNA/cDNA for HIST1H4PS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HIST1H4PS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HIST1H4PS1 Gene

No ASD Table

Relevant External Links for HIST1H4PS1 Gene

GeneLoc Exon Structure for
HIST1H4PS1
ECgene alternative splicing isoforms for
HIST1H4PS1

Expression for HIST1H4PS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HIST1H4PS1 Gene

NURSA nuclear receptor signaling pathways regulating expression of HIST1H4PS1 Gene:

HIST1H4PS1
genes like me logo Genes that share expression patterns with HIST1H4PS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIST1H4PS1 Gene

Orthologs for HIST1H4PS1 Gene

Evolution for HIST1H4PS1 Gene

ENSEMBL:
Gene Tree for HIST1H4PS1 (if available)
TreeFam:
Gene Tree for HIST1H4PS1 (if available)

No data available for Orthologs for HIST1H4PS1 Gene

Paralogs for HIST1H4PS1 Gene

No data available for Paralogs for HIST1H4PS1 Gene

Variants for HIST1H4PS1 Gene

Relevant External Links for HIST1H4PS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIST1H4PS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIST1H4PS1 Gene

Disorders for HIST1H4PS1 Gene

No disorders were found for HIST1H4PS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIST1H4PS1 Gene

Publications for HIST1H4PS1 Gene

  1. The human histone gene cluster at the D6S105 locus. (PMID: 9439656) Albig W … Doenecke D (Human genetics 1997) 2 3 60

Products for HIST1H4PS1 Gene

Sources for HIST1H4PS1 Gene

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