Aliases for HIST1H3PS1 Gene
Aliases for HIST1H3PS1 Gene
External Ids for HIST1H3PS1 Gene
- HGNC: 18982
- Entrez Gene: 100289545
- Ensembl: ENSG00000220875
Previous GeneCards Identifiers for HIST1H3PS1 Gene
- GC00U914064
- GC06U900691
- GC06M026369
- GC06M026381
- GC06M026396
- GC06M026418
- GC06M026448
- GC06M026425
- GC06M026470
- GC06M026491
- GC06M026510
- GC06M026540
Summaries for HIST1H3PS1 Gene
-
Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is a histone pseudogene found on chromosome 6. [provided by RefSeq, Oct 2015]
GeneCards Summary for HIST1H3PS1 Gene
HIST1H3PS1 (Histone Cluster 1 H3 Pseudogene 1) is a Pseudogene.
No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIST1H3PS1 Gene
Genomics for HIST1H3PS1 Gene
Regulatory Elements for HIST1H3PS1 Gene
Enhancers for HIST1H3PS1 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH06G026321 | 1.4 | ENCODE dbSUPER | 0.7 | 0.0 | -46 | 2.7 | HDGF FOXA2 PKNOX1 CREB3L1 MLX ARNT ARID4B SIN3A ZNF2 ZNF766 | ABT1 BTN3A2 HIST1H4H HIST1H3E GC06M026586 HIST1H3PS1 |
| GH06G026320 | 1.2 | ENCODE dbSUPER | 0.7 | +2.5 | 2505 | 0.9 | HDAC1 TBP ATF1 FOXA2 TBL1XR1 ARNT NFRKB ZBTB40 GATA2 ZSCAN5C | HIST1H3E BTN3A2 HIST1H3PS1 TRW-CCA3-1 |
| GH06G026322 | 0.8 | ENCODE dbSUPER | 0.7 | +1.9 | 1895 | 0.0 | ZNF512 E2F5 U2AF1 MLLT1 ZBTB40 | TRW-CCA3-1 HIST1H3PS1 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around HIST1H3PS1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for HIST1H3PS1 Gene
- Chromosome:
- 6
- Start:
- 26,321,876 bp from pter
- End:
- 26,322,292 bp from pter
- Size:
- 417 bases
- Orientation:
- Minus strand
Genomic View for HIST1H3PS1 Gene
Genes around HIST1H3PS1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6p22.2 by Ensembl
- 6p22.2 by Entrez Gene
- 6p22.2 by HGNC
HIST1H3PS1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HIST1H3PS1 Gene
Proteins for HIST1H3PS1 Gene
Post-translational modifications for HIST1H3PS1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for HIST1H3PS1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HIST1H3PS1
- Origene Custom Protein Services for HIST1H3PS1
- Search GeneTex for Proteins for HIST1H3PS1
Assay Products
No data available for DME Specific Peptides for HIST1H3PS1 Gene
Domains & Families for HIST1H3PS1 Gene
Gene Families for HIST1H3PS1 Gene
- HGNC:
Graphical View of Domain Structure for InterPro Entry
No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIST1H3PS1 Gene
Function for HIST1H3PS1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HIST1H3PS1
CRISPR Products
- Browse CRISPR knockouts for HIST1H3PS1
miRNA Products
- Search ViGene Biosciences for HIST1H3PS1
Inhibitory RNA Products
- Search ViGene Biosciences for HIST1H3PS1
Cell Line Products
- Search ViGene Biosciences for HIST1H3PS1
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIST1H3PS1 Gene
Localization for HIST1H3PS1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HIST1H3PS1 Gene
Transcripts for HIST1H3PS1 Gene
mRNA/cDNA for HIST1H3PS1 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for HIST1H3PS1
miRNA Products
- Search ViGene Biosciences for HIST1H3PS1
Inhibitory RNA Products
- Search ViGene Biosciences for HIST1H3PS1
Flow Cytometry Products
Relevant External Links for HIST1H3PS1 Gene
- GeneLoc Exon Structure for
- HIST1H3PS1
- ECgene alternative splicing isoforms for
- HIST1H3PS1
Expression for HIST1H3PS1 Gene
mRNA differential expression in normal tissues according to GTEx for HIST1H3PS1 Gene
This gene is overexpressed in Whole Blood (x13.9) and Brain - Substantia nigra (x5.5).
NURSA nuclear receptor signaling pathways regulating expression of HIST1H3PS1 Gene:
HIST1H3PS1Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIST1H3PS1 Gene
Orthologs for HIST1H3PS1 Gene
Evolution for HIST1H3PS1 Gene
- ENSEMBL:
- Gene Tree for HIST1H3PS1 (if available)
- TreeFam:
- Gene Tree for HIST1H3PS1 (if available)
No data available for Orthologs for HIST1H3PS1 Gene
Paralogs for HIST1H3PS1 Gene
No data available for Paralogs for HIST1H3PS1 Gene
Variants for HIST1H3PS1 Gene
Relevant External Links for HIST1H3PS1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HIST1H3PS1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIST1H3PS1 Gene
Disorders for HIST1H3PS1 Gene
No disorders were found for HIST1H3PS1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIST1H3PS1 Gene
Publications for HIST1H3PS1 Gene
No publications were found for HIST1H3PS1 Gene.
Products for HIST1H3PS1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HIST1H3PS1
- Origene Custom Protein Services for HIST1H3PS1
- Browse OriGene Inhibitory RNA Products For HIST1H3PS1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for HIST1H3PS1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HIST1H3PS1
- GenScript: Custom all cDNA clones Services for HIST1H3PS1
- GenScript Custom Purified and Recombinant Proteins Services for HIST1H3PS1
- GenScript Custom Assay Services for HIST1H3PS1
- GenScript Custom overexpressing Cell Line Services for HIST1H3PS1
- Browse GenScript CRISPR for HIST1H3PS1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for HIST1H3PS1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HIST1H3PS1
- VectorBuilder custom plasmid, inducible vectors for HIST1H3PS1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HIST1H3PS1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HIST1H3PS1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
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- (122) diseasecard
- (123) NIH Rare Diseases
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- (127) Disease Ontology
- (128) Genetics Home Reference
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- (130) MedlinePlus
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- (133) NCBI Bookshelf
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- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer