Aliases for HIST1H2BPS3 Gene
Subcategory (RNA class) for HIST1H2BPS3 Gene
lncRNA
Aliases for HIST1H2BPS3 Gene
External Ids for HIST1H2BPS3 Gene
- HGNC: 42633
- Entrez Gene: 100820735
- Ensembl: ENSG00000226908
ORGUL Members for HIST1H2BPS3 Gene
Previous GeneCards Identifiers for HIST1H2BPS3 Gene
- GC00U933454
- GC13M022059
Summaries for HIST1H2BPS3 Gene
-
Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is a histone pseudogene found on chromosome 13. [provided by RefSeq, Oct 2015]
GeneCards Summary for HIST1H2BPS3 Gene
HIST1H2BPS3 (Histone Cluster 1 H2B Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.
No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIST1H2BPS3 Gene
Genomics for HIST1H2BPS3 Gene
Regulatory Elements for HIST1H2BPS3 Gene
Enhancers for HIST1H2BPS3 Gene
| GeneHancer Identifier | Enhancer Score | Enhancer Sources | Gene-Enhancer Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites within enhancer | Gene Targets for Enhancer |
|---|---|---|---|---|---|---|---|---|
| GH13G021478 | 0.9 | Ensembl ENCODE | 0.7 | +4.8 | 4808 | 0.8 | SCRT1 CTCF ZNF654 ZNF133 REST RAD21 POLR2A ZNF366 ZNF512 SCRT2 | HIST1H2BPS3 ZDHHC20 |
| GH13G021476 | 1.1 | Ensembl ENCODE | 0.4 | +7.0 | 6978 | 1.2 | HDGF CBX3 WRNIP1 ARID4B ZNF2 ZNF48 ZBTB40 RAD21 ZNF143 RELB | HIST1H2BPS3 ZDHHC20 |
| GH13G021464 | 0.8 | ENCODE | 0.4 | +17.8 | 17841 | 2.7 | HDAC1 FOXA2 RARA CEBPB ZEB2 ELF1 PPARG MGA CTCF SOX13 | ZDHHC20 MICU2 HIST1H2BPS3 |
| GH13G021480 | 0.4 | ENCODE | 0.7 | +2.7 | 2746 | 0.9 | RFX1 TEAD3 | ZDHHC20 HIST1H2BPS3 |
| GH13G021483 | 0.4 | Ensembl | 0.7 | +0.3 | 274 | 0.2 | ZBTB33 | HIST1H2BPS3 ZDHHC20 |
- Elite enhancer and/or Elite enhancer-gene association
Download GeneHancer data dump
Enhancers around HIST1H2BPS3 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Location for HIST1H2BPS3 Gene
- Chromosome:
- 13
- Start:
- 21,483,834 bp from pter
- End:
- 21,484,174 bp from pter
- Size:
- 341 bases
- Orientation:
- Minus strand
Genomic View for HIST1H2BPS3 Gene
Genes around HIST1H2BPS3 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 13q12.11 by Ensembl
- 13q12.11 by Entrez Gene
- 13q12.11 by HGNC
HIST1H2BPS3 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for HIST1H2BPS3 Gene
Proteins for HIST1H2BPS3 Gene
Post-translational modifications for HIST1H2BPS3 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for HIST1H2BPS3
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HIST1H2BPS3
- Origene Custom Protein Services for HIST1H2BPS3
- Search GeneTex for Proteins for HIST1H2BPS3
Assay Products
No data available for DME Specific Peptides for HIST1H2BPS3 Gene
Domains & Families for HIST1H2BPS3 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIST1H2BPS3 Gene
Function for HIST1H2BPS3 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for HIST1H2BPS3
CRISPR Products
- Browse CRISPR knockouts for HIST1H2BPS3
miRNA Products
- Search ViGene Biosciences for HIST1H2BPS3
Inhibitory RNA Products
- Search ViGene Biosciences for HIST1H2BPS3
Cell Line Products
- Search ViGene Biosciences for HIST1H2BPS3
Flow Cytometry Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIST1H2BPS3 Gene
Localization for HIST1H2BPS3 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HIST1H2BPS3 Gene
Transcripts for HIST1H2BPS3 Gene
mRNA/cDNA for HIST1H2BPS3 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for HIST1H2BPS3
miRNA Products
- Search ViGene Biosciences for HIST1H2BPS3
Inhibitory RNA Products
- Search ViGene Biosciences for HIST1H2BPS3
Flow Cytometry Products
Relevant External Links for HIST1H2BPS3 Gene
- GeneLoc Exon Structure for
- HIST1H2BPS3
- ECgene alternative splicing isoforms for
- HIST1H2BPS3
Expression for HIST1H2BPS3 Gene
NURSA nuclear receptor signaling pathways regulating expression of HIST1H2BPS3 Gene:
HIST1H2BPS3
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIST1H2BPS3 Gene
Orthologs for HIST1H2BPS3 Gene
Evolution for HIST1H2BPS3 Gene
- ENSEMBL:
- Gene Tree for HIST1H2BPS3 (if available)
- TreeFam:
- Gene Tree for HIST1H2BPS3 (if available)
No data available for Orthologs for HIST1H2BPS3 Gene
Paralogs for HIST1H2BPS3 Gene
No data available for Paralogs for HIST1H2BPS3 Gene
Variants for HIST1H2BPS3 Gene
Relevant External Links for HIST1H2BPS3 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- HIST1H2BPS3
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIST1H2BPS3 Gene
Disorders for HIST1H2BPS3 Gene
No disorders were found for HIST1H2BPS3 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIST1H2BPS3 Gene
Publications for HIST1H2BPS3 Gene
No publications were found for HIST1H2BPS3 Gene.
Products for HIST1H2BPS3 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for HIST1H2BPS3
- Origene Custom Protein Services for HIST1H2BPS3
- Browse OriGene Inhibitory RNA Products For HIST1H2BPS3
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for HIST1H2BPS3
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For HIST1H2BPS3
- GenScript: Custom all cDNA clones Services for HIST1H2BPS3
- GenScript Custom Purified and Recombinant Proteins Services for HIST1H2BPS3
- GenScript Custom Assay Services for HIST1H2BPS3
- GenScript Custom overexpressing Cell Line Services for HIST1H2BPS3
- Browse GenScript CRISPR for HIST1H2BPS3
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
- Gene Synthesis: Any Gene in Any Vector
- Vector-based siRNA and miRNA, Ready for Transfection
- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
- GenScript Custom Peptide Services for HIST1H2BPS3
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Proteins
- Sino Biological Antibodies
- Sino Biological ELISA Kits and Pair Sets
- Sino Biological Cell Lysates
- Sino Biological qPCR Primers
- Sino Biological CRO Services for Proteins, Antibodies and Genes
- Sino Biological Transfection Reagents
- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Cyagen custom Knockout/knockin (KOKI) mouse models for HIST1H2BPS3
- VectorBuilder custom plasmid, inducible vectors for HIST1H2BPS3
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for HIST1H2BPS3
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
Sources for HIST1H2BPS3 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) RNAdb
- (29) ASD
- (30) ECgene
- (31) GeneAnnot
- (32) CGAP SAGE
- (33) SOURCE
- (34) HomoloGene
- (35) PanEnsembl
- (36) euGenes
- (37) SGD
- (38) FlyBase
- (39) WormBase
- (40) Pseudogene
- (41) DGV
- (42) dbSNP
- (43) GenAtlas
- (44) GeneTests
- (45) HGMD
- (46) GAD
- (47) LSDB
- (48) BGMUT
- (49) HuGE
- (50) eBioscience
- (51) Atlas
- (52) Cell Signaling Technology
- (53) GenBank
- (54) H-invDB
- (55) HORDE
- (56) HUGE
- (57) IMGT
- (58) Leiden
- (59) MILLIPORE
- (60) miRBase
- (61) DME
- (62) NCBI
- (63) OriGene
- (64) PubMed
- (65) R&D Systems
- (66) TGDB
- (67) Tocris
- (68) Abcam
- (69) Novus
- (70) ProSpec
- (71) Sino Biological
- (72) GenScript
- (73) Qiagen
- (74) Cloud-Clone Corp.
- (75) Enzo Life Sciences
- (76) OCA
- (77) Proteopedia
- (78) MOPED
- (79) SPIRE
- (80) neXtProt
- (81) Reactome
- (82) GeneGo (Thomson Reuters)
- (83) fRNAdb
- (84) DISEASES
- (85) SIMAP
- (86) GenomeRNAi
- (87) LifeMap
- (88) miRTarBase
- (89) MalaCards
- (90) Invitrogen
- (91) BitterDB
- (92) Vector BioLabs
- (93) ESI-BIO
- (94) RefSeq
- (95) BioSystems
- (96) MaxQB
- (97) IUPHAR
- (98) BioGPS
- (99) Illumina
- (100) COMPARTMENTS
- (101) HOMER
- (102) PaxDb
- (103) ApexBio
- (104) Addgene
- (105) antibodies-online
- (106) CYP
- (107) NONCODE
- (108) SwitchGear Genomics
- (109) TreeFam
- (110) PathCards
- (111) GeneReviews
- (112) GeneTex
- (113) Taconic Biosciences
- (114) GTEx
- (115) ProteomicsDB
- (116) SCBT
- (117) DGIdb
- (118) ClinicalTrials
- (119) FDA Approved Drugs
- (120) RVIS
- (121) SIGNOR
- (122) diseasecard
- (123) NIH Rare Diseases
- (124) Orphanet
- (125) UMLS
- (126) GTR
- (127) Disease Ontology
- (128) Genetics Home Reference
- (129) MeSH
- (130) MedlinePlus
- (131) CDC
- (132) NINDS
- (133) NCBI Bookshelf
- (134) ClinVar
- (135) Gene Damage Index
- (136) ViGene Biosciences
- (137) HPO
- (138) UDN
- (139) VISTA
- (140) FANTOM5
- (141) ENCODE
- (142) ProSci
- (143) Horizon
- (144) NURSA
- (145) IID
- (146) Cyagen
- (147) VectorBuilder
- (148) SNPedia
- (149) BRCA Exchange
- (150) St John's Lab
- (151) CIViC
- (152) ProteoGenix
- (153) dbSUPER
- (154) TISSUES
- (155) Gene ORGANizer