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Aliases for HIST1H2BPS3 Gene

Subcategory (RNA class) for HIST1H2BPS3 Gene


Aliases for HIST1H2BPS3 Gene

  • Histone Cluster 1 H2B Pseudogene 3 2 3 5
  • Histone Cluster 1, H2b, Pseudogene 3 2
  • HIST1H2B Pseudogene 3 2

External Ids for HIST1H2BPS3 Gene

ORGUL Members for HIST1H2BPS3 Gene

Previous GeneCards Identifiers for HIST1H2BPS3 Gene

  • GC00U933454
  • GC13M022059

Summaries for HIST1H2BPS3 Gene

Entrez Gene Summary for HIST1H2BPS3 Gene

  • Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is a histone pseudogene found on chromosome 13. [provided by RefSeq, Oct 2015]

GeneCards Summary for HIST1H2BPS3 Gene

HIST1H2BPS3 (Histone Cluster 1 H2B Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIST1H2BPS3 Gene

Genomics for HIST1H2BPS3 Gene

Regulatory Elements for HIST1H2BPS3 Gene

Enhancers for HIST1H2BPS3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F021478 0.8 Ensembl ENCODE 0.8 +4.8 4803 0.9 SCRT1 CTCF ZNF654 ZNF133 REST RAD21 POLR2A ZNF366 SCRT2 ZNF512 HIST1H2BPS3 ZDHHC20
GH13F021480 0.2 ENCODE 0.8 +2.7 2746 0.9 TEAD3 ZDHHC20 HIST1H2BPS3
GH13F021476 1.1 Ensembl ENCODE 0.4 +7.0 6978 1.2 HDGF CBX3 WRNIP1 ARID4B ZNF48 ZBTB40 ZNF2 RAD21 ZNF143 ZNF263 HIST1H2BPS3 ZDHHC20
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HIST1H2BPS3 on UCSC Golden Path with GeneCards custom track

Promoters for HIST1H2BPS3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001782779 274 201

Genomic Location for HIST1H2BPS3 Gene

21,483,834 bp from pter
21,484,174 bp from pter
341 bases
Minus strand

Genomic View for HIST1H2BPS3 Gene

Genes around HIST1H2BPS3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIST1H2BPS3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIST1H2BPS3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIST1H2BPS3 Gene

Proteins for HIST1H2BPS3 Gene

Post-translational modifications for HIST1H2BPS3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIST1H2BPS3 Gene

Domains & Families for HIST1H2BPS3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIST1H2BPS3 Gene

Function for HIST1H2BPS3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIST1H2BPS3 Gene

Localization for HIST1H2BPS3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HIST1H2BPS3 Gene

Pathways & Interactions for HIST1H2BPS3 Gene

SuperPathways for HIST1H2BPS3 Gene

No Data Available

Interacting Proteins for HIST1H2BPS3 Gene

Gene Ontology (GO) - Biological Process for HIST1H2BPS3 Gene


No data available for Pathways by source and SIGNOR curated interactions for HIST1H2BPS3 Gene

Transcripts for HIST1H2BPS3 Gene

mRNA/cDNA for HIST1H2BPS3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HIST1H2BPS3 Gene

No ASD Table

Relevant External Links for HIST1H2BPS3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HIST1H2BPS3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HIST1H2BPS3 Gene

NURSA nuclear receptor signaling pathways regulating expression of HIST1H2BPS3 Gene:

genes like me logo Genes that share expression patterns with HIST1H2BPS3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HIST1H2BPS3 Gene

Orthologs for HIST1H2BPS3 Gene

Evolution for HIST1H2BPS3 Gene

Gene Tree for HIST1H2BPS3 (if available)
Gene Tree for HIST1H2BPS3 (if available)

No data available for Orthologs for HIST1H2BPS3 Gene

Paralogs for HIST1H2BPS3 Gene

No data available for Paralogs for HIST1H2BPS3 Gene

Variants for HIST1H2BPS3 Gene

Relevant External Links for HIST1H2BPS3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIST1H2BPS3 Gene

Disorders for HIST1H2BPS3 Gene

No disorders were found for HIST1H2BPS3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIST1H2BPS3 Gene

Publications for HIST1H2BPS3 Gene

No publications were found for HIST1H2BPS3 Gene.

Products for HIST1H2BPS3 Gene

Sources for HIST1H2BPS3 Gene

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