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Aliases for HIST1H2APS2 Gene

Aliases for HIST1H2APS2 Gene

  • Histone Cluster 1 H2A Pseudogene 2 2 3 5
  • H2A Histone Family, Member T, Pseudogene 2 3
  • Histone Cluster 1, H2a, Pseudogene 2 2 3
  • Histone 1, H2a, Pseudogene 2 2 3
  • Histone Family Member Pseudogene 3
  • DJ139G21.2 3
  • H2AFTP 3
  • H2A/T 3

External Ids for HIST1H2APS2 Gene

Previous HGNC Symbols for HIST1H2APS2 Gene

  • H2AFTP

Previous GeneCards Identifiers for HIST1H2APS2 Gene

  • GC06M025990
  • GC06M025883
  • GC06M025825

Summaries for HIST1H2APS2 Gene

Entrez Gene Summary for HIST1H2APS2 Gene

  • Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is a histone pseudogene found on chromosome 6. [provided by RefSeq, Oct 2015]

GeneCards Summary for HIST1H2APS2 Gene

HIST1H2APS2 (Histone Cluster 1 H2A Pseudogene 2) is a Pseudogene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIST1H2APS2 Gene

Genomics for HIST1H2APS2 Gene

Regulatory Elements for HIST1H2APS2 Gene

Enhancers for HIST1H2APS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F025966 0.2 Ensembl 10.4 -84.3 -84285 0.2 HIST1H2APS2 SLC17A3 TRIM38 GC06P025976
GH06F025968 0.2 Ensembl 10.4 -83.9 -83885 0.2 HIST1H2APS2 SLC17A3 TRIM38 GC06P025976
GH06F025967 1.3 Ensembl ENCODE 10.4 -86.1 -86074 1.4 ATF3 ZMYM3 ZBTB33 RAD21 YY1 SLC17A3 HIST1H2APS2 GC06P025976 TRIM38
GH06F025884 0.7 ENCODE 0.8 -1.8 -1782 0.2 CEBPB NR3C1 ZNF644 RAD21 NR2F2 YY1 JUND POLR2A ATF3 CEBPA ENSG00000277410 HIST1H2APS2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around HIST1H2APS2 on UCSC Golden Path with GeneCards custom track

Promoters for HIST1H2APS2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001879387 215 800 CTCF ZBTB33 IRF1 RAD21 YY1

Genomic Location for HIST1H2APS2 Gene

25,881,926 bp from pter
25,882,416 bp from pter
491 bases
Minus strand

Genomic View for HIST1H2APS2 Gene

Genes around HIST1H2APS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIST1H2APS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIST1H2APS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIST1H2APS2 Gene

Proteins for HIST1H2APS2 Gene

Post-translational modifications for HIST1H2APS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIST1H2APS2 Gene

Domains & Families for HIST1H2APS2 Gene

Gene Families for HIST1H2APS2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with HIST1H2APS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIST1H2APS2 Gene

Function for HIST1H2APS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIST1H2APS2 Gene

Localization for HIST1H2APS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HIST1H2APS2 Gene

Pathways & Interactions for HIST1H2APS2 Gene

SuperPathways for HIST1H2APS2 Gene

No Data Available

Interacting Proteins for HIST1H2APS2 Gene

Gene Ontology (GO) - Biological Process for HIST1H2APS2 Gene


No data available for Pathways by source and SIGNOR curated interactions for HIST1H2APS2 Gene

Transcripts for HIST1H2APS2 Gene

mRNA/cDNA for HIST1H2APS2 Gene

(19) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for HIST1H2APS2 Gene

No ASD Table

Relevant External Links for HIST1H2APS2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HIST1H2APS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for HIST1H2APS2 Gene

mRNA differential expression in normal tissues according to GTEx for HIST1H2APS2 Gene

This gene is overexpressed in Liver (x40.6) and Adrenal Gland (x6.5).

NURSA nuclear receptor signaling pathways regulating expression of HIST1H2APS2 Gene:

genes like me logo Genes that share expression patterns with HIST1H2APS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for HIST1H2APS2 Gene

Orthologs for HIST1H2APS2 Gene

Evolution for HIST1H2APS2 Gene

Gene Tree for HIST1H2APS2 (if available)
Gene Tree for HIST1H2APS2 (if available)

No data available for Orthologs for HIST1H2APS2 Gene

Paralogs for HIST1H2APS2 Gene

No data available for Paralogs for HIST1H2APS2 Gene

Variants for HIST1H2APS2 Gene

Relevant External Links for HIST1H2APS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIST1H2APS2 Gene

Disorders for HIST1H2APS2 Gene

No disorders were found for HIST1H2APS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIST1H2APS2 Gene

Publications for HIST1H2APS2 Gene

  1. The genomic organization of the histone clusters on human 6p21.3. (PMID: 10384058) Ahn J. … Gruen J.R. (Mamm. Genome 1999) 3 64

Products for HIST1H2APS2 Gene

Sources for HIST1H2APS2 Gene

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