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HIRAP1 Gene(Pseudogene)

Histone Cell Cycle Regulator Pseudogene 1

GCID:
GC10P025691
GIFtS:
12
Genes Participants
UDN Logo

Aliases for HIRAP1 Gene

Subcategory (RNA class) for HIRAP1 Gene

lncRNA

Aliases for HIRAP1 Gene

  • Histone Cell Cycle Regulator Pseudogene 1 2 3 5
  • HIR Histone Cell Cycle Regulation Defective Homolog A Pseudogene 1 2

External Ids for HIRAP1 Gene

ORGUL Members for HIRAP1 Gene

Previous GeneCards Identifiers for HIRAP1 Gene

  • GC10P025982

Summaries for HIRAP1 Gene

GeneCards Summary for HIRAP1 Gene

HIRAP1 (Histone Cell Cycle Regulator Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIRAP1 Gene

Genomics for HIRAP1 Gene

Products:

  1. Regulatory Element

Regulatory Elements for HIRAP1 Gene

Enhancers for HIRAP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G025682 0.6 ENCODE 0.4 -8.8 -8777 1.1 CTCF ZNF654 JUND ATF3 JUN CEBPG IRF1 RAD21 HIRAP1 LINC00836
GH10G025765 1.1 Ensembl ENCODE 0.2 +74.9 74887 1.6 HDAC1 PKNOX1 ATF1 TBL1XR1 ARNT CHAMP1 TCF12 GATA2 ZEB2 NFIC MYO3A RNA5SP306 HIRAP1
GH10G025753 0.9 FANTOM5 Ensembl 0.2 +62.5 62453 0.4 ATF3 ZNF512 CEBPB TRIM24 CEBPG ZIC2 ATF2 MYO3A RNA5SP306 HIRAP1
GH10G025686 0.3 FANTOM5 0.4 -5.0 -5049 0.2 HIRAP1 LINC00836
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HIRAP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for HIRAP1 Gene

Chromosome:
10
Start:
25,691,537 bp from pter
End:
25,692,328 bp from pter
Size:
792 bases
Orientation:
Plus strand

Genomic View for HIRAP1 Gene

Genes around HIRAP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIRAP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIRAP1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for HIRAP1 Gene

Proteins for HIRAP1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for HIRAP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIRAP1 Gene

Domains & Families for HIRAP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIRAP1 Gene

Function for HIRAP1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIRAP1 Gene

Localization for HIRAP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for HIRAP1 Gene

Pathways & Interactions for HIRAP1 Gene

SuperPathways for HIRAP1 Gene

PathCards logo More details on SuperPathways for HIRAP1
No Data Available

Interacting Proteins for HIRAP1 Gene

Gene Ontology (GO) - Biological Process for HIRAP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HIRAP1 Gene

Drugs & Compounds for HIRAP1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for HIRAP1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

mRNA/cDNA for HIRAP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for HIRAP1 Gene

No ASD Table

Relevant External Links for HIRAP1 Gene

GeneLoc Exon Structure for
HIRAP1
ECgene alternative splicing isoforms for
HIRAP1

Expression for HIRAP1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HIRAP1 Gene

mRNA expression in normal human tissues for HIRAP1 Gene
mRNA expression by GTEx for HIRAP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of HIRAP1 Gene:

HIRAP1
genes like me logo Genes that share expression patterns with HIRAP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIRAP1 Gene

Orthologs for HIRAP1 Gene

Evolution for HIRAP1 Gene

ENSEMBL:
Gene Tree for HIRAP1 (if available)
TreeFam:
Gene Tree for HIRAP1 (if available)

No data available for Orthologs for HIRAP1 Gene

Paralogs for HIRAP1 Gene

No data available for Paralogs for HIRAP1 Gene

Variants for HIRAP1 Gene

Relevant External Links for HIRAP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIRAP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIRAP1 Gene

Disorders for HIRAP1 Gene

No disorders were found for HIRAP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIRAP1 Gene

Publications for HIRAP1 Gene

No publications were found for HIRAP1 Gene.

Products for HIRAP1 Gene

Sources for HIRAP1 Gene

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