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Aliases for HIGD1AP3 Gene

Subcategory (RNA class) for HIGD1AP3 Gene


Aliases for HIGD1AP3 Gene

  • HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 3 2 3 5
  • HIG1 Hypoxia Inducible Domain Family, Member 1A Pseudogene 3 2

External Ids for HIGD1AP3 Gene

ORGUL Members for HIGD1AP3 Gene

Previous GeneCards Identifiers for HIGD1AP3 Gene

  • GC05P174060

Summaries for HIGD1AP3 Gene

GeneCards Summary for HIGD1AP3 Gene

HIGD1AP3 (HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for HIGD1AP3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIGD1AP3 Gene

Genomics for HIGD1AP3 Gene

GeneHancer (GH) Regulatory Elements for HIGD1AP3 Gene

Promoters and enhancers for HIGD1AP3 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I174635 Enhancer 0.6 ENCODE 0.8 +3.4 3351 0.8 ZNF664 CTBP1 PKNOX1 JUND GATA3 MNT RCOR1 ZNF592 HIGD1AP3 LOC105377741
GH05I174615 Enhancer 0.7 ENCODE 0.4 -15.4 -15414 4.1 NFIB ZMYM3 CTBP1 GATA3 ZNF213 ZBTB48 ZSCAN5C RCOR1 CHD2 TCF7L2 LOC105377740 MSX2 HIGD1AP3
GH05I174624 Enhancer 0.6 ENCODE 0.4 -8.3 -8264 1.3 CTCF KLF17 CEBPG ZEB2 GATA3 JUND PRDM10 WT1 HIGD1AP3 LOC105377740
GH05I174717 Enhancer 1 FANTOM5 ENCODE 0.2 +87.1 87084 4.5 ZBTB6 ZNF223 KLF17 SIN3A HIC1 ZNF335 ZFHX2 ZNF157 PRDM10 FOSL2 LOC105377741 MSX2 HIGD1AP3
GH05I174660 Enhancer 0.6 UCNEbase 0.3 +27.6 27617 0.2 SCRT2 SP7 MSX2 HIGD1AP3 LOC105377741
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around HIGD1AP3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for HIGD1AP3 Gene

Genomic Locations for HIGD1AP3 Gene
281 bases
Plus strand

Genomic View for HIGD1AP3 Gene

Genes around HIGD1AP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIGD1AP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIGD1AP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIGD1AP3 Gene

Proteins for HIGD1AP3 Gene

Post-translational modifications for HIGD1AP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIGD1AP3 Gene

Domains & Families for HIGD1AP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIGD1AP3 Gene

Function for HIGD1AP3 Gene

Phenotypes From GWAS Catalog for HIGD1AP3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIGD1AP3 Gene

Localization for HIGD1AP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HIGD1AP3 Gene

Pathways & Interactions for HIGD1AP3 Gene

SuperPathways for HIGD1AP3 Gene

No Data Available

Interacting Proteins for HIGD1AP3 Gene

Gene Ontology (GO) - Biological Process for HIGD1AP3 Gene


No data available for Pathways by source and SIGNOR curated interactions for HIGD1AP3 Gene

Drugs & Compounds for HIGD1AP3 Gene

No Compound Related Data Available

Transcripts for HIGD1AP3 Gene

mRNA/cDNA for HIGD1AP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for HIGD1AP3 Gene

No ASD Table

Relevant External Links for HIGD1AP3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for HIGD1AP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HIGD1AP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of HIGD1AP3 Gene:

genes like me logo Genes that share expression patterns with HIGD1AP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIGD1AP3 Gene

Orthologs for HIGD1AP3 Gene

Evolution for HIGD1AP3 Gene

Gene Tree for HIGD1AP3 (if available)
Gene Tree for HIGD1AP3 (if available)

No data available for Orthologs for HIGD1AP3 Gene

Paralogs for HIGD1AP3 Gene

No data available for Paralogs for HIGD1AP3 Gene

Variants for HIGD1AP3 Gene

Additional Variant Information for HIGD1AP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIGD1AP3 Gene

Disorders for HIGD1AP3 Gene

No disorders were found for HIGD1AP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIGD1AP3 Gene

Publications for HIGD1AP3 Gene

No publications were found for HIGD1AP3 Gene.

Products for HIGD1AP3 Gene

Sources for HIGD1AP3 Gene

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