Free for academic non-profit institutions. Other users need a Commercial license

Aliases for HIGD1AP15 Gene

Aliases for HIGD1AP15 Gene

  • HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 15 2 3 5
  • HIG1 Hypoxia Inducible Domain Family, Member 1A Pseudogene 15 2

External Ids for HIGD1AP15 Gene

Previous GeneCards Identifiers for HIGD1AP15 Gene

  • GC20P010310

Summaries for HIGD1AP15 Gene

GeneCards Summary for HIGD1AP15 Gene

HIGD1AP15 (HIG1 Hypoxia Inducible Domain Family Member 1A Pseudogene 15) is a Pseudogene.

Additional gene information for HIGD1AP15 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for HIGD1AP15 Gene

Genomics for HIGD1AP15 Gene

Regulatory Elements for HIGD1AP15 Gene

Enhancers for HIGD1AP15 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20H010333 0.6 ENCODE 0.7 -0.9 -935 0 OSR2 PRDM6 INSM2 FEZF1 ZNF600 ZEB2 ZNF24 HIGD1AP15 GC20P010311
GH20H010328 0.9 Ensembl ENCODE 0.4 -5.9 -5868 0 SREBF1 FOXA2 LCORL MXD4 HNF4A KMT2B ZSCAN9 ZKSCAN1 YY1 HIGD1AP15 GC20P010311
GH20H010313 0.8 Ensembl ENCODE 0.3 -20.0 -20039 1 OSR2 POLR2A FEZF1 WT1 TCF7L2 EGR2 TRIM28 MKKS GC20P010311 HIGD1AP15
GH20H010319 0.6 FANTOM5 0.4 -15.6 -15552 0 SCRT1 RAD51 NFYB SCRT2 USF2 ZNF354B LOC100421490 MKKS GC20P010311 HIGD1AP15
GH20H010329 0.6 Ensembl 0.4 -5.3 -5254 0 OSR2 IRF2 PRDM6 JUND ATF3 ZEB2 KMT2B YY1 HIGD1AP15 GC20P010311
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around HIGD1AP15 on UCSC Golden Path with GeneCards custom track

Genomic Location for HIGD1AP15 Gene

Chromosome:
20
Start:
10,334,354 bp from pter
End:
10,335,218 bp from pter
Size:
865 bases
Orientation:
Plus strand

Genomic View for HIGD1AP15 Gene

Genes around HIGD1AP15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
HIGD1AP15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for HIGD1AP15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for HIGD1AP15 Gene

Proteins for HIGD1AP15 Gene

Post-translational modifications for HIGD1AP15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for HIGD1AP15 Gene

Domains & Families for HIGD1AP15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for HIGD1AP15 Gene

Function for HIGD1AP15 Gene

Phenotypes From GWAS Catalog for HIGD1AP15 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HIGD1AP15
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for HIGD1AP15 Gene

Localization for HIGD1AP15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for HIGD1AP15 Gene

Pathways & Interactions for HIGD1AP15 Gene

SuperPathways for HIGD1AP15 Gene

No Data Available

Interacting Proteins for HIGD1AP15 Gene

Gene Ontology (GO) - Biological Process for HIGD1AP15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for HIGD1AP15 Gene

Drugs & Compounds for HIGD1AP15 Gene

No Compound Related Data Available

Transcripts for HIGD1AP15 Gene

mRNA/cDNA for HIGD1AP15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for HIGD1AP15
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for HIGD1AP15 Gene

No ASD Table

Relevant External Links for HIGD1AP15 Gene

GeneLoc Exon Structure for
HIGD1AP15
ECgene alternative splicing isoforms for
HIGD1AP15

Expression for HIGD1AP15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for HIGD1AP15 Gene

NURSA nuclear receptor signaling pathways regulating expression of HIGD1AP15 Gene:

HIGD1AP15
genes like me logo Genes that share expression patterns with HIGD1AP15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for HIGD1AP15 Gene

Orthologs for HIGD1AP15 Gene

Evolution for HIGD1AP15 Gene

ENSEMBL:
Gene Tree for HIGD1AP15 (if available)
TreeFam:
Gene Tree for HIGD1AP15 (if available)

No data available for Orthologs for HIGD1AP15 Gene

Paralogs for HIGD1AP15 Gene

No data available for Paralogs for HIGD1AP15 Gene

Variants for HIGD1AP15 Gene

Relevant External Links for HIGD1AP15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
HIGD1AP15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for HIGD1AP15 Gene

Disorders for HIGD1AP15 Gene

No disorders were found for HIGD1AP15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for HIGD1AP15 Gene

Publications for HIGD1AP15 Gene

No publications were found for HIGD1AP15 Gene.

Products for HIGD1AP15 Gene

Sources for HIGD1AP15 Gene

Content
Loading form....